Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
O00370 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
O00370 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.65□□□□□ -1.99
O00370 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
O00370 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.64□□□□□ -1.99
O00370 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
O00370 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
O00370 MTND4P14-201ENST00000435799 1354 ntBASIC2.64□□□□□ -1.99
O00370 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.64□□□□□ -1.99
O00370 NACAP2-201ENST00000318548 624 ntBASIC2.64□□□□□ -1.99
O00370 RNU6-552P-201ENST00000362869 119 ntBASIC2.64□□□□□ -1.99
O00370 U3.12-201ENST00000364498 214 ntBASIC2.64□□□□□ -1.99
O00370 RNU6-1072P-201ENST00000384703 107 ntBASIC2.64□□□□□ -1.99
O00370 RNU6-443P-201ENST00000384780 107 ntBASIC2.64□□□□□ -1.99
O00370 AF274854.1-201ENST00000413236 615 ntBASIC2.64□□□□□ -1.99
O00370 UBE2V1P10-201ENST00000414685 269 ntBASIC2.64□□□□□ -1.99
O00370 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.64□□□□□ -1.99
O00370 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.64□□□□□ -1.99
O00370 MTND1P34-201ENST00000438556 671 ntBASIC2.64□□□□□ -1.99
O00370 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.64□□□□□ -1.99
O00370 AC112206.3-201ENST00000514578 389 ntBASIC2.64□□□□□ -1.99
O00370 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.64□□□□□ -1.99
O00370 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.64□□□□□ -1.99
O00370 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.64□□□□□ -1.99
O00370 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.64□□□□□ -1.99
O00370 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.64□□□□□ -1.99
O00370 AC234778.2-201ENST00000566241 354 ntBASIC2.64□□□□□ -1.99
O00370 EIF1P4-201ENST00000572664 335 ntBASIC2.64□□□□□ -1.99
O00370 AC009163.5-201ENST00000575421 637 ntBASIC2.64□□□□□ -1.99
O00370 MIR1273C-201ENST00000578669 77 ntBASIC2.64□□□□□ -1.99
O00370 MIR5583-1-201ENST00000580941 59 ntBASIC2.64□□□□□ -1.99
O00370 AC004492.1-201ENST00000607036 742 ntBASIC2.64□□□□□ -1.99
O00370 U4.3-201ENST00000621047 82 ntBASIC2.64□□□□□ -1.99
O00370 AC004520.1-201ENST00000608362 1413 ntBASIC2.64□□□□□ -1.99
O00370 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
O00370 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
O00370 AL136360.1-201ENST00000503377 1900 ntBASIC2.64□□□□□ -1.99
O00370 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
O00370 AC093536.2-201ENST00000565257 1406 ntBASIC2.63□□□□□ -1.99
O00370 RNU6-778P-201ENST00000363269 103 ntBASIC2.63□□□□□ -1.99
O00370 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
O00370 RNU6-1090P-201ENST00000364065 94 ntBASIC2.63□□□□□ -1.99
O00370 RNU4-12P-201ENST00000365233 139 ntBASIC2.63□□□□□ -1.99
O00370 U8.8-201ENST00000365399 135 ntBASIC2.63□□□□□ -1.99
O00370 SNORA75B-201ENST00000384053 137 ntBASIC2.63□□□□□ -1.99
O00370 RNU6-750P-201ENST00000390946 107 ntBASIC2.63□□□□□ -1.99
O00370 RPS4XP7-201ENST00000406274 780 ntBASIC2.63□□□□□ -1.99
O00370 RNU4-46P-201ENST00000410818 138 ntBASIC2.63□□□□□ -1.99
O00370 EEF1A1P40-201ENST00000412883 573 ntBASIC2.63□□□□□ -1.99
O00370 NDUFS5P4-201ENST00000412983 318 ntBASIC2.63□□□□□ -1.99
O00370 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.63□□□□□ -1.99
O00370 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.63□□□□□ -1.99
O00370 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
O00370 AL078601.1-201ENST00000444542 271 ntBASIC2.63□□□□□ -1.99
O00370 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.63□□□□□ -1.99
O00370 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.63□□□□□ -1.99
O00370 AL356010.1-201ENST00000456364 102 ntBASIC2.63□□□□□ -1.99
O00370 SNRPFP3-201ENST00000457792 225 ntBASIC2.63□□□□□ -1.99
O00370 AC073901.1-201ENST00000462471 408 ntBASIC2.63□□□□□ -1.99
O00370 AC107626.1-201ENST00000471084 183 ntBASIC2.63□□□□□ -1.99
O00370 RNU6-1183P-201ENST00000517054 60 ntBASIC2.63□□□□□ -1.99
O00370 SCARNA11.3-201ENST00000517276 130 ntBASIC2.63□□□□□ -1.99
O00370 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.63□□□□□ -1.99
O00370 HIF1AP1-201ENST00000553642 175 ntBASIC2.63□□□□□ -1.99
O00370 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.63□□□□□ -1.99
O00370 MIR3616-201ENST00000584070 92 ntBASIC2.63□□□□□ -1.99
O00370 AL645944.1-201ENST00000603857 493 ntBASIC2.63□□□□□ -1.99
O00370 AC007938.3-201ENST00000604965 623 ntBASIC2.63□□□□□ -1.99
O00370 AC093788.1-201ENST00000609356 927 ntBASIC2.63□□□□□ -1.99
O00370 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.63□□□□□ -1.99
O00370 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.63□□□□□ -1.99
O00370 MIR3199-2-201ENST00000636243 86 ntBASIC2.63□□□□□ -1.99
O00370 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
O00370 MAPK10-266ENST00000641066 6555 ntBASIC2.63□□□□□ -1.99
O00370 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
O00370 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
O00370 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
O00370 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
O00370 RNU6-1322P-201ENST00000364309 107 ntBASIC2.62□□□□□ -1.99
O00370 RNU6-715P-201ENST00000365204 103 ntBASIC2.62□□□□□ -1.99
O00370 RNU6-898P-201ENST00000365627 104 ntBASIC2.62□□□□□ -1.99
O00370 RNU6-517P-201ENST00000384362 110 ntBASIC2.62□□□□□ -1.99
O00370 Y_RNA.554-201ENST00000384672 102 ntBASIC2.62□□□□□ -1.99
O00370 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
O00370 RNU6-192P-201ENST00000391253 100 ntBASIC2.62□□□□□ -1.99
O00370 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
O00370 AL606923.1-201ENST00000406616 190 ntBASIC2.62□□□□□ -1.99
O00370 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.62□□□□□ -1.99
O00370 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.62□□□□□ -1.99
O00370 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
O00370 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.62□□□□□ -1.99
O00370 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.62□□□□□ -1.99
O00370 AC016691.1-201ENST00000441321 413 ntBASIC2.62□□□□□ -1.99
O00370 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.62□□□□□ -1.99
O00370 OSTCP8-201ENST00000445117 448 ntBASIC2.62□□□□□ -1.99
O00370 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
O00370 AC022493.1-201ENST00000492984 337 ntBASIC2.62□□□□□ -1.99
O00370 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.62□□□□□ -1.99
O00370 RNA5SP401-201ENST00000515920 127 ntBASIC2.62□□□□□ -1.99
O00370 RNU5F-8P-201ENST00000515941 111 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms