Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNU6-387P-201ENST00000411331 105 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DDX39AO00148 TOMM20P4-201ENST00000427861 435 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX39AO00148 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX39AO00148 AL365400.1-201ENST00000431854 640 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX39AO00148 AC104850.1-201ENST00000435940 476 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 CALM1P1-201ENST00000442082 433 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX39AO00148 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.35□□□□□ -2.03
DDX39AO00148 RBBP4P6-201ENST00000508098 202 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX39AO00148 Vault.3-201ENST00000516676 95 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 RNU2-46P-201ENST00000517038 113 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX39AO00148 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX39AO00148 CR383656.8-201ENST00000549046 145 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.35□□□□□ -2.03
DDX39AO00148 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.35□□□□□ -2.03
DDX39AO00148 AC008521.1-201ENST00000587471 187 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 MIR219B-201ENST00000637023 88 ntBASIC2.35□□□□□ -2.03
DDX39AO00148 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DDX39AO00148 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DDX39AO00148 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 MIR186-201ENST00000384988 86 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AL139156.1-201ENST00000412785 841 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX39AO00148 AL031779.1-201ENST00000415663 330 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX39AO00148 AC008267.5-201ENST00000424928 265 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.34□□□□□ -2.03
DDX39AO00148 AIMP1P2-201ENST00000425294 312 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.34□□□□□ -2.03
DDX39AO00148 PGBD4P3-201ENST00000440731 581 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AL136380.1-201ENST00000447970 162 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX39AO00148 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX39AO00148 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX39AO00148 RNU2-53P-201ENST00000516257 147 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 SCARNA24.1-201ENST00000516465 137 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 Y_RNA.687-201ENST00000516558 91 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 RNU6-1220P-201ENST00000517126 108 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC109329.1-201ENST00000518744 317 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 IGLV3-17-201ENST00000519099 244 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 MIR3682-201ENST00000581338 84 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 NDUFA8P1-201ENST00000605525 367 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AL121917.1-203ENST00000605534 577 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC138649.3-201ENST00000622154 254 ntBASIC2.34□□□□□ -2.03
DDX39AO00148 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX39AO00148 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.34□□□□□ -2.03
DDX39AO00148 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.34□□□□□ -2.04
DDX39AO00148 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
DDX39AO00148 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 SNORA25B-201ENST00000365507 128 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 SNORD116-20-201ENST00000384529 92 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 RPS3AP3-201ENST00000411933 242 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 EEF1A1P40-201ENST00000412883 573 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AL365203.2-201ENST00000423444 196 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX39AO00148 AC073614.1-201ENST00000438690 650 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 IPO7P1-201ENST00000442031 636 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AL360271.2-201ENST00000447710 161 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 RPL38P4-201ENST00000502376 214 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC116562.3-201ENST00000506136 177 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 SNORA4.4-201ENST00000515921 135 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.33□□□□□ -2.04
DDX39AO00148 AC068587.5-201ENST00000528506 175 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.33□□□□□ -2.04
DDX39AO00148 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX39AO00148 AC093249.1-201ENST00000567049 203 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX39AO00148 MIR5692A1-201ENST00000580523 69 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC007229.1-201ENST00000590455 412 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC078899.2-201ENST00000595282 212 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AL670379.4-201ENST00000605279 254 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AL121992.2-201ENST00000606262 256 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX39AO00148 AC008250.2-201ENST00000615261 205 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 uc_338.15-201ENST00000615470 191 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 AC009159.2-201ENST00000617603 606 ntBASIC2.33□□□□□ -2.04
DDX39AO00148 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX39AO00148 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
DDX39AO00148 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX39AO00148 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
DDX39AO00148 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX39AO00148 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
DDX39AO00148 SNORA16B-201ENST00000364674 135 ntBASIC2.32□□□□□ -2.04
DDX39AO00148 RNY4P34-201ENST00000364779 95 ntBASIC2.32□□□□□ -2.04
DDX39AO00148 RNU6-1032P-201ENST00000384100 107 ntBASIC2.32□□□□□ -2.04
DDX39AO00148 AL591034.2-201ENST00000402839 359 ntBASIC2.32□□□□□ -2.04
DDX39AO00148 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
DDX39AO00148 AC027124.2-201ENST00000428249 105 ntBASIC2.32□□□□□ -2.04
DDX39AO00148 CALM2P2-201ENST00000428512 440 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms