Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 RNU6-415P-201ENST00000516252 97 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AP001646.1-201ENST00000527936 915 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC018630.3-201ENST00000542637 96 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC004908.3-201ENST00000610248 625 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 RMST_4.1-201ENST00000616886 107 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC108479.2-201ENST00000617314 601 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AL731566.2-201ENST00000618971 317 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AL159153.1-201ENST00000619688 317 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 AC138649.3-201ENST00000622154 254 ntBASIC1.57□□□□□ -2.16
SMKR1H3BMG3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 SNORA8-201ENST00000384574 139 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MIR196B-201ENST00000384852 84 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MIR221-201ENST00000385135 110 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 RNA5SP465-201ENST00000391195 109 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MIR1262-201ENST00000408276 93 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MIR1283-2-201ENST00000408621 87 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 RNU2-40P-201ENST00000410833 196 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 C1DP2-201ENST00000418167 426 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC005005.2-201ENST00000420779 380 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 HMGN2P38-201ENST00000423806 265 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MTND5P25-201ENST00000430499 799 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 RPL21P133-201ENST00000443666 476 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AL136380.1-201ENST00000447970 162 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AL353752.1-201ENST00000454946 260 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 SNRPFP4-201ENST00000456366 242 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 Vault.3-201ENST00000516676 95 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MIR5007-201ENST00000583098 95 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 MIR4448-201ENST00000584360 86 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 ELOCP29-201ENST00000588193 334 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 BNIP3P8-201ENST00000597863 560 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC012065.4-201ENST00000602445 679 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 WISP1-OT1-201ENST00000602893 642 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AL078605.1-201ENST00000603529 500 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC092354.1-201ENST00000606057 376 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC009159.2-201ENST00000617603 606 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC009831.4-201ENST00000620744 325 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 AC131159.1-201ENST00000621854 213 ntBASIC1.56□□□□□ -2.16
SMKR1H3BMG3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.56□□□□□ -2.16
SMKR1H3BMG3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AL365361.1-201ENST00000566942 3481 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 RNU6-78P-201ENST00000362897 107 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 RNA5SP212-201ENST00000391223 107 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 RN7SKP284-201ENST00000411002 343 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 SRIP3-201ENST00000413200 219 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC107081.1-201ENST00000414975 361 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 MTND4P20-201ENST00000424125 869 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC000111.3-201ENST00000433478 193 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC073614.1-201ENST00000438690 650 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 MTND1P30-201ENST00000441241 901 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 RPL21P99-201ENST00000480369 423 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC011825.1-201ENST00000484967 388 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 RPL30P1-201ENST00000488676 339 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 MTND3P25-201ENST00000509243 135 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC090572.1-201ENST00000519251 160 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC106038.2-201ENST00000520706 568 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AP005639.2-201ENST00000527592 928 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 GTF3AP2-201ENST00000557014 266 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC009314.1-201ENST00000603871 304 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AC006023.1-201ENST00000603944 259 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 AL136363.2-201ENST00000604173 851 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 OR2AS2P-201ENST00000606902 342 ntBASIC1.55□□□□□ -2.16
SMKR1H3BMG3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms