Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MIR3937-201ENST00000580135 106 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC005261.5-201ENST00000596280 355 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 uc_338.17-201ENST00000619633 179 ntBASIC0.4□□□□□ -2.35
RGPD3A6NKT7 AC110491.1-201ENST00000562191 2010 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 AC092125.1-201ENST00000562568 1995 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 HMGB1P17-201ENST00000403495 628 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 RPL21P24-201ENST00000413752 448 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 AC132479.1-201ENST00000449160 144 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.39□□□□□ -2.35
RGPD3A6NKT7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.39□□□□□ -2.35
RGPD3A6NKT7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.39□□□□□ -2.35
RGPD3A6NKT7 HMGB1P51-201ENST00000605166 638 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 AL022345.2-201ENST00000606307 135 ntBASIC0.39□□□□□ -2.35
RGPD3A6NKT7 RNU2-64P-201ENST00000411315 191 ntBASIC0.38□□□□□ -2.35
RGPD3A6NKT7 AC121161.1-201ENST00000510606 652 ntBASIC0.38□□□□□ -2.35
RGPD3A6NKT7 AC005741.1-201ENST00000511094 432 ntBASIC0.38□□□□□ -2.35
RGPD3A6NKT7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.38□□□□□ -2.35
RGPD3A6NKT7 MZT1P2-201ENST00000604387 248 ntBASIC0.38□□□□□ -2.35
RGPD3A6NKT7 RNA5SP327-201ENST00000362494 101 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 SNORA25B-201ENST00000365507 128 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 SNORD51-201ENST00000384320 80 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 RNA5SP100-201ENST00000410903 110 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 RNA5SP59-201ENST00000410922 110 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 RPL26P6-201ENST00000440913 438 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 RPL21P47-201ENST00000483696 477 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 MIR5190-201ENST00000581537 80 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC004492.1-201ENST00000607036 742 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC009033.1-201ENST00000624279 431 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 GTF2IP13-201ENST00000438487 386 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 RNU4-18P-201ENST00000516751 149 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC002400.1-201ENST00000569310 726 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AL713866.2-201ENST00000603579 219 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC134026.1-201ENST00000623249 2239 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 AC040168.1-201ENST00000623594 991 ntBASIC0.37□□□□□ -2.35
RGPD3A6NKT7 MTND4P16-201ENST00000466108 1367 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 SNORA4.1-201ENST00000364263 144 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 MIR19B1-201ENST00000384829 87 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 AL031577.2-201ENST00000404133 280 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.36□□□□□ -2.35
RGPD3A6NKT7 AL590383.1-201ENST00000428602 75 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.36□□□□□ -2.35
RGPD3A6NKT7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.36□□□□□ -2.35
RGPD3A6NKT7 AL163195.1-201ENST00000496941 348 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RGPD3A6NKT7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RGPD3A6NKT7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.36□□□□□ -2.35
RGPD3A6NKT7 AL031176.1-201ENST00000604554 466 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 Z75746.1-201ENST00000440243 2080 ntBASIC0.36□□□□□ -2.35
RGPD3A6NKT7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 RNU5A-1-201ENST00000362698 116 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 RNU6-884P-201ENST00000363889 107 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 RPS25P9-201ENST00000435591 252 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 AL358794.1-201ENST00000445689 381 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.35□□□□□ -2.35
RGPD3A6NKT7 SMURF2P1-201ENST00000514992 481 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 COPS8P3-201ENST00000526024 482 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 AP005229.2-201ENST00000609980 697 ntBASIC0.35□□□□□ -2.35
RGPD3A6NKT7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.35□□□□□ -2.35
RGPD3A6NKT7 AL591034.2-201ENST00000402839 359 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AC097463.2-201ENST00000421074 142 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AC027119.1-201ENST00000440877 241 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 MTCO1P44-201ENST00000441935 243 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.34□□□□□ -2.35
RGPD3A6NKT7 SCARNA1-201ENST00000517138 166 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.34□□□□□ -2.35
RGPD3A6NKT7 TRAV32-201ENST00000553993 340 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AL022067.1-201ENST00000602426 454 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 BBIP1P1-201ENST00000602999 279 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 AC073569.3-201ENST00000619055 682 ntBASIC0.34□□□□□ -2.35
RGPD3A6NKT7 RNU6-741P-201ENST00000383889 107 ntBASIC0.34□□□□□ -2.36
RGPD3A6NKT7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
RGPD3A6NKT7 MTND1P16-201ENST00000465177 898 ntBASIC0.34□□□□□ -2.36
RGPD3A6NKT7 COX6CP6-201ENST00000490840 228 ntBASIC0.34□□□□□ -2.36
RGPD3A6NKT7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.34□□□□□ -2.36
RGPD3A6NKT7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.34□□□□□ -2.36
RGPD3A6NKT7 NRON-201ENST00000517270 370 ntBASIC0.34□□□□□ -2.36
RGPD3A6NKT7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.34□□□□□ -2.36
RGPD3A6NKT7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.34□□□□□ -2.36
RGPD3A6NKT7 SNORA77B-201ENST00000578179 125 ntBASIC0.34□□□□□ -2.36
RGPD3A6NKT7 RNA5SP331-201ENST00000364986 107 ntBASIC0.33□□□□□ -2.36
RGPD3A6NKT7 SNORD82-201ENST00000365530 70 ntBASIC0.33□□□□□ -2.36
RGPD3A6NKT7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.33□□□□□ -2.36
RGPD3A6NKT7 RNU2-43P-201ENST00000410306 190 ntBASIC0.33□□□□□ -2.36
RGPD3A6NKT7 AC127391.1-201ENST00000411737 98 ntBASIC0.33□□□□□ -2.36
RGPD3A6NKT7 RPS3AP37-201ENST00000419176 745 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms