Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 RRN3P3-201ENST00000549207 578 ntBASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 AC097468.3-201ENST00000607956 456 ntBASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 MIR6845-201ENST00000613182 61 ntBASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 MIR1248-201ENST00000629190 106 ntBASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 MTND5P42-201ENST00000637720 498 ntBASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
TRAV12-1A0A0B4J245 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 MIR208A-201ENST00000362287 71 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 Y_RNA.33-201ENST00000362591 102 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 RNA5SP493-201ENST00000364115 91 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU6-622P-201ENST00000384272 103 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL591212.2-201ENST00000433923 257 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC003071.1-201ENST00000451219 789 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 RPL23AP35-201ENST00000451906 501 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL353752.1-201ENST00000454946 260 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 HMGB1P30-201ENST00000492455 606 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU6-914P-201ENST00000516749 109 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AP000907.2-201ENST00000530827 353 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL356057.1-201ENST00000533798 831 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL157871.3-201ENST00000557231 293 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 SUB1P4-201ENST00000566062 339 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 MIR3169-201ENST00000578032 83 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC078795.2-201ENST00000602835 1252 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC131235.4-201ENST00000609288 620 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC124016.2-201ENST00000610058 665 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AC245297.2-201ENST00000610119 565 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 AL589994.2-201ENST00000621124 579 ntBASIC0.8□□□□□ -2.28
TRAV12-1A0A0B4J245 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 snoU2_19.1-201ENST00000362361 80 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 SNORA75B-201ENST00000384053 137 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 MIR513A1-201ENST00000385138 129 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 RN7SKP266-201ENST00000410232 287 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU2-23P-201ENST00000410545 195 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 OR6C66P-201ENST00000414917 930 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC009518.2-201ENST00000418056 731 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AL135790.2-201ENST00000437701 267 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC245517.4-201ENST00000448601 281 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AL583843.1-201ENST00000456070 346 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC108059.3-201ENST00000456388 214 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 RPS26P55-201ENST00000471178 356 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 UBL5P3-201ENST00000475112 231 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AP001025.1-201ENST00000486139 332 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 RPL30P1-201ENST00000488676 339 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 SUMO2P5-201ENST00000506790 245 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC021146.8-201ENST00000507455 733 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC019288.1-201ENST00000557918 224 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC005668.1-201ENST00000571142 476 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 SNORA77B-201ENST00000578179 125 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 MIR1273C-201ENST00000578669 77 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC073413.2-201ENST00000604332 360 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC024060.1-201ENST00000607052 494 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC022893.3-201ENST00000607665 437 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AL365204.3-201ENST00000612448 685 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC130324.3-201ENST00000614165 542 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AP003476.1-201ENST00000623984 516 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 AC008993.2-201ENST00000631744 806 ntBASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU6-212P-201ENST00000362642 104 ntBASIC0.78□□□□□ -2.28
TRAV12-1A0A0B4J245 SNORD114-1-201ENST00000362705 72 ntBASIC0.78□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU6-560P-201ENST00000364007 108 ntBASIC0.78□□□□□ -2.28
TRAV12-1A0A0B4J245 SNORA62.1-201ENST00000364287 154 ntBASIC0.78□□□□□ -2.28
TRAV12-1A0A0B4J245 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU6-160P-201ENST00000384591 107 ntBASIC0.78□□□□□ -2.28
TRAV12-1A0A0B4J245 RNU6-939P-201ENST00000384634 107 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms