Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 TRBVA-201ENST00000498804 316 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 PDCD5P2-201ENST00000507570 312 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 RPL23AP94-201ENST00000512518 302 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 VN1R80P-201ENST00000597126 338 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AL590240.4-201ENST00000616908 390 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AC009032.1-201ENST00000617574 431 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AC013470.4-201ENST00000619978 986 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.36□□□□□ -2.35
TRAV13-2A0A0B4J235 AC233981.2-201ENST00000611524 1614 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 MIR1261-201ENST00000408659 82 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 CYCSP33-201ENST00000414485 327 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 RPS26P5-201ENST00000418544 335 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC010099.3-201ENST00000423896 409 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 TIMM9P1-201ENST00000436122 256 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AL157398.1-201ENST00000452981 186 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 snoU13.23-201ENST00000458863 104 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC130509.1-201ENST00000464158 433 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 BET1P1-201ENST00000482276 359 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC023194.1-201ENST00000493084 308 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 ARL2BPP4-201ENST00000506854 471 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 SNORA3.4-201ENST00000515969 96 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 RN7SKP219-201ENST00000516825 296 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AP003484.1-201ENST00000530974 250 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 MIR3664-201ENST00000579074 99 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 MIR3973-201ENST00000579824 107 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 RN7SL622P-201ENST00000585292 275 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 BNIP3P10-201ENST00000605360 577 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC112220.2-201ENST00000605513 533 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC130454.1-201ENST00000622948 401 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 AC019226.1-201ENST00000625666 515 ntBASIC0.35□□□□□ -2.35
TRAV13-2A0A0B4J235 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRAV13-2A0A0B4J235 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORD114-24-201ENST00000365029 72 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR520E-201ENST00000384867 87 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-754P-201ENST00000391166 107 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 RPL21P111-201ENST00000418453 477 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AL139421.1-201ENST00000423010 169 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 MTCYBP11-201ENST00000447254 1109 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORD124-201ENST00000459577 104 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC134050.1-201ENST00000495088 933 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 RNA5SP503-201ENST00000517047 117 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AL356057.1-201ENST00000533798 831 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC133485.1-201ENST00000567176 124 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC138907.6-201ENST00000568401 126 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR5094-201ENST00000578766 85 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC105129.3-201ENST00000605455 485 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AL390208.1-201ENST00000605885 644 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AC009229.3-201ENST00000608056 282 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 AP001033.2-201ENST00000609701 1003 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 TUG1_2.1-201ENST00000614234 87 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 U6.99-201ENST00000637524 83 ntBASIC0.34□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-1010P-201ENST00000362757 107 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORD114-6-201ENST00000364393 72 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR508-201ENST00000384857 115 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR548B-201ENST00000385247 97 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-1300P-201ENST00000391046 108 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 DHFRP6-201ENST00000401776 268 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 RPS15AP12-201ENST00000419498 388 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 TPTE2P1-204ENST00000435256 593 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 CALM1P1-201ENST00000442082 433 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC020550.1-201ENST00000447385 163 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 RNA5SP269-201ENST00000459032 137 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 COX6CP6-201ENST00000490840 228 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 RN7SKP256-201ENST00000517201 314 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC090142.3-201ENST00000519012 385 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AL353997.4-201ENST00000586196 166 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 BNIP3P16-201ENST00000589779 534 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms