Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RNU6-174P-201ENST00000410406 106 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 HMGB1P31-201ENST00000437242 427 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 MTND4P25-201ENST00000441039 533 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL078601.1-201ENST00000444542 271 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC017099.1-201ENST00000448261 1028 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 PAXBP1P1-201ENST00000449315 447 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 SNORD13-201ENST00000459299 104 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 RPS3AP22-201ENST00000488297 769 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 RNA5SP445-201ENST00000515889 115 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 RNVU1-2-201ENST00000516326 135 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 RNU6-902P-201ENST00000517212 91 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC103987.3-201ENST00000582071 292 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 VN1R83P-201ENST00000595685 445 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AC012065.4-201ENST00000602445 679 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL158827.2-201ENST00000602494 330 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 WISP1-OT1-201ENST00000602893 642 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL354696.1-201ENST00000614652 497 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL136313.1-201ENST00000624804 202 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 AL691447.3-201ENST00000635020 330 ntBASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TMEM56-RWDD3S4R434 HAUS6P2-201ENST00000433254 2404 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 RNU6-1284P-201ENST00000363701 100 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 RNU6-944P-201ENST00000364023 107 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 RNU6-701P-201ENST00000384059 107 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 SNORA40C-201ENST00000391285 128 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 MIR1289-2-201ENST00000408360 111 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 CYCSP49-201ENST00000420810 319 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 RAC1P6-201ENST00000423911 575 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 MED28P2-201ENST00000475771 317 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC117532.1-201ENST00000514638 323 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 RNU6-965P-201ENST00000516721 96 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 RNU1-92P-201ENST00000517017 135 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC109329.1-201ENST00000518744 317 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC090821.2-201ENST00000523552 176 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 OR8K2P-201ENST00000524645 927 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AP003034.1-201ENST00000534621 422 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AC019288.1-201ENST00000557918 224 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 AL050343.2-201ENST00000607338 280 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 MTND5P33-201ENST00000571250 1450 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 FARSBP1-201ENST00000435808 1778 ntBASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.03□□□□□ -2.24
TMEM56-RWDD3S4R434 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-743P-201ENST00000364151 106 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 NEFMP1-201ENST00000443423 1006 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AP000542.1-201ENST00000448473 371 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AC002400.1-201ENST00000569310 726 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 DDX43P2-201ENST00000604753 1354 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AP002802.2-201ENST00000605877 235 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 AL512643.1-201ENST00000635735 524 ntBASIC1.02□□□□□ -2.25
TMEM56-RWDD3S4R434 SNORA70.7-201ENST00000384159 133 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-166P-201ENST00000384371 107 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 RNU6-1222P-201ENST00000384615 107 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 Y_RNA.578-201ENST00000390903 88 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AL359704.1-201ENST00000411586 781 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 RPS12P24-201ENST00000412619 387 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 NCOR1P3-201ENST00000420479 303 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 TOMM22P2-201ENST00000430735 237 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 EEF1E1P1-201ENST00000446998 430 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC010409.1-201ENST00000487382 476 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC108729.1-201ENST00000487812 947 ntBASIC1.01□□□□□ -2.25
TMEM56-RWDD3S4R434 AC025465.3-201ENST00000510570 311 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms