Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-21P-201ENST00000384710 107 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.590-201ENST00000410140 107 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 RNU4-30P-201ENST00000410245 143 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-651P-201ENST00000411040 105 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AL645608.4-201ENST00000423619 154 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AL450023.3-201ENST00000440592 271 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AC000111.2-201ENST00000448200 210 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 RPL23AP81-201ENST00000455252 467 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.638-201ENST00000459374 113 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AC087477.1-201ENST00000465747 340 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AF186996.7-201ENST00000492781 209 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 RNU7-200P-201ENST00000516105 62 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AC105129.1-201ENST00000560250 297 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 ZNF192P1-203ENST00000565888 810 ntBASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
HCN4Q9Y3Q4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 SNORA25.1-201ENST00000362326 128 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 Z98749.2-208ENST00000381646 500 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-281P-201ENST00000384212 103 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 RNU6-918P-201ENST00000391219 106 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 RPL19P1-201ENST00000411635 428 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 SSXP4-201ENST00000451349 245 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 RNA5SP249-201ENST00000516127 99 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 Y_RNA.679-201ENST00000516416 91 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 RNU7-110P-201ENST00000516891 62 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 AC004832.4-201ENST00000608952 331 ntBASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HCN4Q9Y3Q4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
HCN4Q9Y3Q4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.71□□□□□ -1.65
HCN4Q9Y3Q4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-942P-201ENST00000363002 107 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-626P-201ENST00000363354 107 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 Y_RNA.233-201ENST00000364407 101 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RNA5SP72-201ENST00000364442 117 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 SNORA29-201ENST00000384183 140 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MIR218-2-201ENST00000385006 110 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MIR518D-201ENST00000385014 87 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 UBA52P6-201ENST00000399822 382 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-394P-201ENST00000410735 107 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RPL36AP10-201ENST00000421785 322 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MTATP6P7-201ENST00000453315 681 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AC091021.1-201ENST00000468051 388 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 UBE2CP3-201ENST00000502715 450 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AC091868.1-201ENST00000508746 304 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 SNORA27.4-201ENST00000516650 95 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MIR5195-201ENST00000583555 115 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AC005000.2-201ENST00000605468 310 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 AC005296.1-201ENST00000616145 209 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MIR8059-201ENST00000620427 81 ntBASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.71□□□□□ -1.66
HCN4Q9Y3Q4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 RNA5SP361-201ENST00000362686 118 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 RNU5B-2P-201ENST00000363036 113 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 Y_RNA.230-201ENST00000364348 109 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-142P-201ENST00000384019 107 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 RNU6-541P-201ENST00000384709 110 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 Y_RNA.570-201ENST00000384750 101 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 PTMAP5-201ENST00000393073 333 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 AL357515.1-201ENST00000402967 542 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 RN7SKP51-201ENST00000410781 304 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 AL451074.5-201ENST00000415894 435 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 RPL23AP95-201ENST00000426806 265 ntBASIC4.7□□□□□ -1.66
HCN4Q9Y3Q4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 709.2 ms