Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL606517.1-201ENST00000446914 387 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 snoU13.14-201ENST00000459372 104 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 RPS29P21-201ENST00000496272 170 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 PTP4A1P4-201ENST00000512479 322 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 SNORA31.23-201ENST00000517219 133 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 MIR4307-201ENST00000582802 84 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AL353778.1-201ENST00000603149 408 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 CYP2C61P-201ENST00000604072 290 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AL132822.1-201ENST00000617063 513 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 SCARNA4-202ENST00000625402 129 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 AC110994.2-201ENST00000635481 492 ntBASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.62□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-931P-201ENST00000363850 107 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-234P-201ENST00000365229 104 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-622P-201ENST00000384272 103 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-636P-201ENST00000384598 107 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 RNU11-3P-201ENST00000391111 133 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AL079342.1-201ENST00000401460 267 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 RNU2-23P-201ENST00000410545 195 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 HMGN2P3-201ENST00000433603 273 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 HMGN2P5-201ENST00000436882 273 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AL583843.1-201ENST00000456070 346 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AL121594.1-201ENST00000475906 575 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AC007182.2-201ENST00000489251 402 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AC134050.1-201ENST00000495088 933 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AC104685.1-201ENST00000502445 371 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AP003392.2-201ENST00000527269 208 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AL138889.2-201ENST00000603883 242 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AC090517.3-201ENST00000625170 141 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 AC092192.1-201ENST00000633154 1018 ntBASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-942P-201ENST00000363002 107 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 RNA5SP126-201ENST00000365092 109 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-72P-201ENST00000384285 79 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL445685.2-201ENST00000422551 342 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL365400.1-201ENST00000431854 640 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL008629.1-201ENST00000438615 184 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 SSXP1-201ENST00000453640 473 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC121334.2-201ENST00000605387 271 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC116312.1-201ENST00000606841 314 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC087241.4-201ENST00000612441 480 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AL359547.2-201ENST00000615810 418 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AP000484.1-201ENST00000620067 1252 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC024940.5-201ENST00000622889 474 ntBASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.6□□□□□ -2.15
RHBDD3Q9Y3P4 AC233981.2-201ENST00000611524 1614 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 RNU1-58P-201ENST00000362413 163 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 SNORD115-3-201ENST00000363100 82 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 SNORA70B-201ENST00000384210 135 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC019129.1-201ENST00000403786 261 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 MIR1262-201ENST00000408276 93 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC084290.1-201ENST00000434995 374 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 HSPE1P21-201ENST00000438283 308 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 USP9YP17-201ENST00000444617 696 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AL136380.1-201ENST00000447970 162 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 RNA5SP57-201ENST00000459463 123 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC119751.4-201ENST00000507498 357 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 MIR4513-201ENST00000581077 86 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AP000860.1-201ENST00000605250 559 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 AC103710.2-201ENST00000609912 942 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 U6.42-201ENST00000618440 107 ntBASIC1.59□□□□□ -2.15
RHBDD3Q9Y3P4 OR4G2P-201ENST00000328113 903 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 RNU4-26P-201ENST00000410270 107 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 RNU6-757P-201ENST00000410334 100 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms