Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 Z98742.3-201ENST00000418637 326 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AL160275.3-201ENST00000423876 471 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC007560.1-201ENST00000426912 237 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 RPL31P35-201ENST00000431058 377 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC244505.5-201ENST00000443639 207 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC079781.2-201ENST00000446424 169 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AL118520.1-201ENST00000450770 291 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC022493.1-201ENST00000492984 337 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 MTCO3P28-201ENST00000513351 515 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-123P-201ENST00000516163 102 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 Y_RNA.695-201ENST00000516715 107 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 MTND2P38-201ENST00000522536 667 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 ADI1P3-201ENST00000549509 470 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC137800.2-201ENST00000574375 120 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 LRRC37A5P-203ENST00000580181 585 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC245014.2-201ENST00000603689 287 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AC246785.4-201ENST00000605374 287 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 AP001486.3-201ENST00000615334 372 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 Z69908.1-201ENST00000622603 247 ntBASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TRAPPC4Q9Y296 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-179P-201ENST00000363350 107 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 SNORA3A-201ENST00000364113 130 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 Y_RNA.367-201ENST00000365544 101 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-108P-201ENST00000365558 107 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 CISD1P1-201ENST00000393907 327 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 U3.40-201ENST00000408706 208 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RN7SKP192-201ENST00000411291 327 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-387P-201ENST00000411331 105 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 C1DP2-201ENST00000418167 426 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 DPH3P2-201ENST00000422618 250 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 MTCYBP5-201ENST00000423752 1135 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC092001.1-201ENST00000453012 261 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC116562.3-201ENST00000506136 177 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC091965.2-201ENST00000512324 613 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 SNORD27.1-201ENST00000516319 72 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 Y_RNA.688-201ENST00000516565 95 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-410P-201ENST00000517006 107 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-685P-201ENST00000517088 95 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC068587.5-201ENST00000528506 175 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 LINC00933-203ENST00000559812 219 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC008521.1-201ENST00000587471 187 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC008121.1-201ENST00000603244 268 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC087752.4-201ENST00000605911 462 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC126118.1-201ENST00000607744 628 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC109347.2-201ENST00000610220 349 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC024940.5-201ENST00000622889 474 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AC093648.1-201ENST00000623546 606 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 AL157786.1-207ENST00000627771 695 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRAPPC4Q9Y296 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 ELL2P3-201ENST00000457883 1602 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 AC004944.1-201ENST00000517807 3059 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 MTND4P27-201ENST00000450813 1354 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 Y_RNA.77-201ENST00000362962 107 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 Y_RNA.201-201ENST00000364052 96 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-74P-201ENST00000384235 107 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-348P-201ENST00000384386 107 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 RNU6-19P-201ENST00000384718 107 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 SNORA3.2-201ENST00000408221 125 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 PTGES3P4-201ENST00000426243 356 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 GPR143P-201ENST00000434155 205 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 USP9YP29-201ENST00000445112 563 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 AC079448.1-201ENST00000449377 373 ntBASIC1.91□□□□□ -2.1
TRAPPC4Q9Y296 NDUFB1P2-201ENST00000449477 176 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms