Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CR769776.1-201ENST00000441254 787 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 MTCO1P53-201ENST00000441633 699 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 HMGN2P9-201ENST00000476875 229 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 SNORA31.22-201ENST00000517204 135 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 CR383656.7-201ENST00000548164 174 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 AL031176.1-201ENST00000604554 466 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 AL355472.4-201ENST00000610233 626 ntBASIC0.65□□□□□ -2.31
SHANK2Q9UPX8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 SNORD115-3-201ENST00000363100 82 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 RNU6-884P-201ENST00000363889 107 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AL356776.1-201ENST00000406574 447 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 MIR1283-2-201ENST00000408621 87 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AC013410.2-201ENST00000422627 201 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AC098831.1-201ENST00000440661 216 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AC022483.1-201ENST00000514020 567 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 SNORD19.2-201ENST00000516978 73 ntBASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SHANK2Q9UPX8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 RNU6-439P-201ENST00000384188 106 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 RNU2-43P-201ENST00000410306 190 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 Z82210.1-201ENST00000440037 231 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC244505.3-201ENST00000454598 187 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AL133373.1-201ENST00000497098 94 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC005832.3-201ENST00000537929 631 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC027104.1-201ENST00000563702 681 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AC006001.4-201ENST00000622243 395 ntBASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.63□□□□□ -2.31
SHANK2Q9UPX8 RNU1-96P-201ENST00000364163 162 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 SNORD1A-201ENST00000364968 72 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 USP9YP24-201ENST00000434374 697 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 AL135790.2-201ENST00000437701 267 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 AC091435.1-201ENST00000505442 584 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 SMURF2P1-201ENST00000514992 481 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 HIGD1AP6-201ENST00000521833 279 ntBASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.62□□□□□ -2.31
SHANK2Q9UPX8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 SNORA29-201ENST00000384183 140 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 ZNF863P-201ENST00000426746 417 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AL606489.2-201ENST00000433886 234 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 SNORA25.11-201ENST00000515935 105 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 RNU4-77P-201ENST00000516692 156 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AP003034.1-201ENST00000534621 422 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 ADAM3B-201ENST00000569937 840 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC005261.5-201ENST00000596280 355 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 BNIP3P23-201ENST00000599655 511 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC016542.1-201ENST00000608259 493 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 RNU6-968P-201ENST00000384076 107 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 MIR514A1-201ENST00000385133 98 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC006461.1-201ENST00000412637 326 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC097463.2-201ENST00000421074 142 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AL035666.1-201ENST00000446195 348 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 MTND1P33-201ENST00000446251 917 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC124293.1-201ENST00000530034 493 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC125611.1-201ENST00000549563 229 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC090115.3-201ENST00000553218 849 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC021739.1-201ENST00000559631 174 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC021171.1-201ENST00000603137 706 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AP003400.6-201ENST00000624698 740 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC083865.1-201ENST00000636634 831 ntBASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.61□□□□□ -2.31
SHANK2Q9UPX8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 MIR409-201ENST00000362237 79 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 Y_RNA.170-201ENST00000363746 110 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 MTND2P24-201ENST00000453434 806 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AC006512.1-201ENST00000468816 291 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AC018868.1-201ENST00000491307 315 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 RNU6-491P-201ENST00000516099 110 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 RNA5SP291-201ENST00000517222 105 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 CYB5AP5-201ENST00000549779 389 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AC004217.3-201ENST00000551552 878 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AL359212.1-201ENST00000556608 614 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AL671309.1-201ENST00000603750 544 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AC018618.2-201ENST00000604770 446 ntBASIC0.6□□□□□ -2.31
SHANK2Q9UPX8 AC011374.2-201ENST00000607135 526 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms