Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 Y_RNA.787-201ENST00000616522 101 ntBASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 AC068831.7-201ENST00000616954 363 ntBASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.780-201ENST00000617336 101 ntBASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.801-201ENST00000619005 101 ntBASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 AL359757.2-201ENST00000624309 274 ntBASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.57□□□□□ -1.84
SCAF8Q9UPN6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.138-201ENST00000363462 102 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.167-201ENST00000363735 109 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.378-201ENST00000365652 113 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 RNU6-1035P-201ENST00000384477 107 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 RNU6-692P-201ENST00000384496 107 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 ARL5AP1-201ENST00000418991 388 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 RPL21P40-201ENST00000428586 483 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 PRPS1P1-201ENST00000445305 876 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 RNU6-1208P-201ENST00000459588 107 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 MTND4P17-201ENST00000470444 350 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC083904.1-201ENST00000487828 231 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC026801.1-201ENST00000497178 464 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AP005597.4-201ENST00000526762 229 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AP003072.1-201ENST00000531740 145 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AL121821.2-201ENST00000556081 394 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC092807.2-201ENST00000609367 243 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC006111.3-201ENST00000622137 383 ntBASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCAF8Q9UPN6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.162-201ENST00000363683 102 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.301-201ENST00000364990 103 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.387-201ENST00000383918 102 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.414-201ENST00000384011 101 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 Y_RNA.530-201ENST00000384587 101 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AL445529.1-201ENST00000398713 389 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 RPL7P46-201ENST00000425129 740 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 RNU7-66P-201ENST00000459469 62 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 TRBV12-1-201ENST00000479785 344 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC006445.2-201ENST00000510061 472 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 RNU6-123P-201ENST00000516163 102 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 RNU6-914P-201ENST00000516749 109 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 RNA5SP471-201ENST00000516971 106 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AL137161.1-201ENST00000532231 390 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 MTCO3P13-201ENST00000577757 781 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 BNIP3P25-201ENST00000596023 559 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC008962.1-201ENST00000605729 304 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC107294.3-201ENST00000609211 526 ntBASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCAF8Q9UPN6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC009487.2-201ENST00000420969 6821 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 RNU6-512P-201ENST00000364438 103 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 RNU6-140P-201ENST00000384566 108 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AL592114.1-201ENST00000403842 483 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 USP9YP20-201ENST00000419224 558 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC236972.2-201ENST00000434979 310 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 SNRPEP9-201ENST00000436794 238 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 SNORD19B-201ENST00000459623 84 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AL135752.1-201ENST00000479477 471 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC012181.1-201ENST00000479895 423 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 RNU6-864P-201ENST00000516256 108 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 MIR1273C-201ENST00000578669 77 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 MIR15A-201ENST00000607334 83 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 FTX_3.1-201ENST00000610451 147 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 uc_338.15-201ENST00000615470 191 ntBASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.54□□□□□ -1.84
SCAF8Q9UPN6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms