Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC108729.3-201ENST00000513484 108 ntBASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.42□□□□□ -1.7
SHROOM4Q9ULL8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-1287P-201ENST00000362914 107 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 SNORD115-7-201ENST00000365306 82 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 RNU6-1060P-201ENST00000384664 107 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AL161651.1-201ENST00000440882 223 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 MTCO2P18-201ENST00000457151 658 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 EIF4EP3-201ENST00000498782 656 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AC006199.1-201ENST00000548728 219 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 MIR3611-201ENST00000584484 83 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AL645944.1-201ENST00000603857 493 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AL138889.2-201ENST00000603883 242 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AC084035.1-201ENST00000634543 607 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 MIR7515-201ENST00000637837 67 ntBASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM4Q9ULL8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM4Q9ULL8 CKAP2P1-201ENST00000555477 2049 ntBASIC4.4□□□□□ -1.7
SHROOM4Q9ULL8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM4Q9ULL8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.4□□□□□ -1.7
SHROOM4Q9ULL8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 MIR412-201ENST00000362142 91 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 Y_RNA.51-201ENST00000362725 102 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 Y_RNA.164-201ENST00000363709 102 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-282P-201ENST00000365357 103 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC104332.2-201ENST00000429959 156 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC079448.1-201ENST00000449377 373 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC233279.1-201ENST00000455300 423 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC098591.2-201ENST00000510152 315 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-56P-201ENST00000516986 93 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 COX6CP5-201ENST00000527162 228 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC087045.1-201ENST00000605856 382 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 snoU13.31-201ENST00000607291 104 ntBASIC4.4□□□□□ -1.71
SHROOM4Q9ULL8 AC004520.1-201ENST00000608362 1413 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 DEFB108C-201ENST00000400154 252 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 RPL36AP21-201ENST00000490372 323 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC079382.1-201ENST00000493346 557 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 GZMAP1-201ENST00000503054 631 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 SCARNA11.3-201ENST00000517276 130 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 MIR4775-201ENST00000581168 75 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AL391813.1-201ENST00000603098 260 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AL589743.7-201ENST00000612637 233 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 MIR6873-201ENST00000622788 63 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AC011155.2-201ENST00000623202 216 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 AL160394.1-201ENST00000624765 724 ntBASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.39□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-1120P-201ENST00000362988 108 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 RNU4-48P-201ENST00000365559 182 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 MIR627-201ENST00000384979 97 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 AL358934.1-201ENST00000432346 324 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 RPS15AP28-201ENST00000435088 386 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 MTND1P29-201ENST00000448112 647 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 RPS3AP17-201ENST00000472594 777 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-581P-201ENST00000516214 105 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 AC067747.1-201ENST00000608026 250 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 MIR6134-201ENST00000617606 109 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 AC048344.4-201ENST00000619744 527 ntBASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-371P-201ENST00000364283 108 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 Y_RNA.359-201ENST00000365498 102 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 Y_RNA.367-201ENST00000365544 101 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-166P-201ENST00000384371 107 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 MTCO2P11-201ENST00000431069 680 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 AL627311.1-201ENST00000431514 115 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 RPS26P21-201ENST00000475397 348 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 AC092185.1-201ENST00000491371 97 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 RNU6-295P-201ENST00000516901 104 ntBASIC4.37□□□□□ -1.71
SHROOM4Q9ULL8 SNORA31.18-201ENST00000517043 134 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms