Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-121P-201ENST00000410525 99 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 RN7SKP177-201ENST00000410567 355 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 YME1L1P1-201ENST00000429435 297 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AL513124.1-201ENST00000450410 614 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 UBE2CP3-201ENST00000502715 450 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC067942.3-201ENST00000512025 362 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 RNU1-103P-201ENST00000516502 125 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 MIR2355-201ENST00000517199 87 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC091144.1-201ENST00000519573 138 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AP004607.1-201ENST00000524456 203 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AP003733.2-201ENST00000529409 171 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 TRAV8-5-201ENST00000537369 341 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC010186.2-204ENST00000537668 439 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 H3F3AP1-201ENST00000559984 334 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 ZNF192P1-203ENST00000565888 810 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC012468.1-201ENST00000604888 430 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 MIR6867-201ENST00000610636 67 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC141273.2-201ENST00000618989 130 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC090740.1-201ENST00000623193 2262 ntBASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.57□□□□□ -1.84
CDC42EP3Q9UKI2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RLIMP1-201ENST00000339626 1680 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 SNORA71.3-201ENST00000362582 128 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 U3.13-201ENST00000364804 214 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P75-201ENST00000396599 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P28-201ENST00000401418 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RNU2-38P-201ENST00000410856 79 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RNU2-71P-201ENST00000411395 189 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL26P27-201ENST00000414397 437 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AL590556.1-201ENST00000423231 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL23AP25-201ENST00000430973 463 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL23AP52-201ENST00000439311 478 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC006026.2-201ENST00000457376 180 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P11-201ENST00000461458 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P39-201ENST00000463605 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC087190.1-201ENST00000484462 480 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC107032.1-201ENST00000485945 480 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC132942.1-201ENST00000486753 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPS26P15-201ENST00000488067 348 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC093591.1-201ENST00000491435 481 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P16-201ENST00000495531 483 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RNU7-175P-201ENST00000515915 61 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RNA5SP49-201ENST00000516450 115 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC007458.1-201ENST00000542812 373 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 MIR4644-201ENST00000579929 84 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 MIR3128-201ENST00000581957 66 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RPL23AP78-201ENST00000599928 470 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 FAM27D1-201ENST00000612308 341 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 CR392039.5-201ENST00000623201 510 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC093908.1-201ENST00000623125 8092 ntBASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.56□□□□□ -1.84
CDC42EP3Q9UKI2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 SNORA63.1-201ENST00000362493 131 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 RNU1-73P-201ENST00000383971 164 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 RNY3P4-201ENST00000384428 101 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 RNU1-44P-201ENST00000384453 163 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 RNU6-1093P-201ENST00000391194 107 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 RPL21P65-201ENST00000406094 466 ntBASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.55□□□□□ -1.84
CDC42EP3Q9UKI2 GOT2P5-201ENST00000433995 546 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms