Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU2-68P-201ENST00000410878 191 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 USP9YP6-201ENST00000413550 854 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 GPM6BP2-201ENST00000432046 144 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC244505.5-201ENST00000443639 207 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 GPM6BP1-201ENST00000446387 144 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 FGF7P6-202ENST00000451282 293 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 RPL37P6-201ENST00000460682 294 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AP000797.1-201ENST00000478870 387 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC092989.1-201ENST00000481235 277 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC090096.1-201ENST00000489168 390 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 RNA5SP165-201ENST00000517142 115 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC091489.2-201ENST00000566263 604 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC009127.3-201ENST00000570531 403 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AL353621.2-201ENST00000605340 133 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 uc_338.12-201ENST00000616344 181 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 AC099654.10-201ENST00000640395 161 ntBASIC2.62□□□□□ -1.99
CLIP2Q9UDT6 UBE2L2-201ENST00000254302 429 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 Y_RNA.70-201ENST00000362886 110 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AL109913.1-201ENST00000421173 514 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AL356583.2-201ENST00000426536 280 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 HMGB1P27-201ENST00000431429 603 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 HMGB1P31-201ENST00000437242 427 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 SNRPEP8-201ENST00000442866 260 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AL031659.1-201ENST00000447075 539 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 NFU1P2-201ENST00000448700 469 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 RNU6-314P-201ENST00000516574 104 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 BTF3P12-201ENST00000519620 469 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AP000889.2-201ENST00000532684 490 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AK6P1-201ENST00000540219 478 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AC023824.2-201ENST00000566185 400 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 MIR5697-201ENST00000578045 78 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AL355598.1-201ENST00000604169 202 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AL022154.1-201ENST00000604698 785 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AC091834.1-201ENST00000614543 472 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 AC073544.1-201ENST00000600110 1595 ntBASIC2.61□□□□□ -1.99
CLIP2Q9UDT6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU5F-7P-201ENST00000363696 115 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU6-1090P-201ENST00000364065 94 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU4-91P-201ENST00000364778 135 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU4-12P-201ENST00000365233 139 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU6-14P-201ENST00000384630 106 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 SNORA40.3-201ENST00000390964 122 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RN7SKP32-201ENST00000410167 303 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU6-195P-201ENST00000411352 109 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 HMGN1P14-201ENST00000412459 517 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 WARS2P1-201ENST00000429678 537 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 PGBD4P3-201ENST00000440731 581 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 MTATP6P7-201ENST00000453315 681 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC104435.1-201ENST00000483483 166 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC098591.2-201ENST00000510152 315 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 RNU6-703P-201ENST00000516946 107 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 ADI1P3-201ENST00000549509 470 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AC005771.1-201ENST00000585581 349 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL356055.1-201ENST00000602528 446 ntBASIC2.6□□□□□ -1.99
CLIP2Q9UDT6 AL670379.6-201ENST00000603753 252 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms