Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR634-201ENST00000385208 97 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 HMGB3P12-201ENST00000438745 556 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AL606517.1-201ENST00000446914 387 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 PRELID3BP1-201ENST00000457142 540 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC027575.1-201ENST00000481064 460 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC104564.1-201ENST00000493028 407 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC119751.5-201ENST00000514077 770 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 RNU6-1092P-201ENST00000516955 87 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC109329.1-201ENST00000518744 317 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC108747.1-201ENST00000609508 535 ntBASIC1.49□□□□□ -2.17
VAPAQ9P0L0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VAPAQ9P0L0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 Y_RNA.46-201ENST00000362695 102 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 SNORD114-1-201ENST00000362705 72 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 RNU6-529P-201ENST00000363383 104 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 RNU6-946P-201ENST00000383878 107 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 RNU6-611P-201ENST00000384276 104 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 U8.13-201ENST00000390842 128 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL365338.1-201ENST00000422282 858 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL022400.1-201ENST00000423946 935 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC245102.2-201ENST00000448956 180 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 SSXP1-201ENST00000453640 473 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 HMGB1P30-201ENST00000492455 606 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 Y_RNA.689-201ENST00000516589 107 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC022254.1-201ENST00000567857 235 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL670379.2-201ENST00000604983 252 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL670379.4-201ENST00000605279 254 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC012360.2-201ENST00000609349 391 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AL355816.2-201ENST00000610049 647 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 AC006338.1-201ENST00000618453 749 ntBASIC1.48□□□□□ -2.17
VAPAQ9P0L0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VAPAQ9P0L0 WWP1P1-201ENST00000466609 2769 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 MTND4P23-201ENST00000447723 1363 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 MTND4P16-201ENST00000466108 1367 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 RNU6-511P-201ENST00000363496 107 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 RNU5E-6P-201ENST00000365574 115 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 SNORD14D-201ENST00000384390 87 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 RNU6-757P-201ENST00000410334 100 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 EIF4EP2-201ENST00000422816 654 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 PTENP1-201ENST00000447117 1215 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC104058.1-201ENST00000448028 297 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC010486.1-201ENST00000511793 424 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 PTP4A1P4-201ENST00000512479 322 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC123904.2-201ENST00000548059 300 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC097478.2-201ENST00000610572 514 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 MIR6845-201ENST00000613182 61 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 uc_338.12-201ENST00000616344 181 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC021755.4-201ENST00000616620 456 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AL132822.1-201ENST00000617063 513 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AP000484.1-201ENST00000620067 1252 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 AC024940.5-201ENST00000622889 474 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.47□□□□□ -2.17
VAPAQ9P0L0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC006026.1-201ENST00000444025 1803 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 MTND5P10-201ENST00000603719 1809 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNU6-655P-201ENST00000362858 107 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNU6-942P-201ENST00000363002 107 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNU6-743P-201ENST00000364151 106 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNA5SP501-201ENST00000410990 112 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 Y_RNA.623-201ENST00000411128 95 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 UBE2V1P4-201ENST00000425374 344 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms