Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 TPT1P8-201ENST00000510120 555 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 AC091965.2-201ENST00000512324 613 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 MRPS36P3-201ENST00000519284 130 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 IGKV3-31-201ENST00000523109 329 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 SNRPGP17-201ENST00000603780 214 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 AL160281.1-201ENST00000605307 311 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 MIR7106-201ENST00000612419 65 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 AC090517.3-201ENST00000625170 141 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC59Q9P031 CTSLP2-204ENST00000629029 392 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 AP006437.1-201ENST00000641440 3685 ntBASIC1.69□□□□□ -2.14
CCDC59Q9P031 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCDC59Q9P031 SNORD116-20-201ENST00000384529 92 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 RNU6-1179P-201ENST00000384667 107 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 AL589872.1-201ENST00000426602 288 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC006512.1-201ENST00000468816 291 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 RPS3AP14-201ENST00000483907 780 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC097462.2-201ENST00000504623 481 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 Y_RNA.687-201ENST00000516558 91 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 CYCSP27-201ENST00000527643 293 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AL139286.2-201ENST00000606838 396 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC027807.2-201ENST00000616099 408 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.68□□□□□ -2.14
CCDC59Q9P031 AC008555.8-201ENST00000623602 2168 ntBASIC1.68□□□□□ -2.14
CCDC59Q9P031 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 RNU6-655P-201ENST00000362858 107 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNORD48-201ENST00000364953 64 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNORA24.1-201ENST00000384401 135 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 RNU6-1274P-201ENST00000384557 107 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 MIR578-201ENST00000384828 96 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 MIR23B-201ENST00000384832 97 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNORA40.19-201ENST00000390846 128 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNORA11.4-201ENST00000408823 129 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AL031779.1-201ENST00000415663 330 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 ELOCP4-201ENST00000420090 333 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 PGBD4P6-201ENST00000421501 610 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 MTCO3P5-201ENST00000433620 714 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AL109933.2-201ENST00000452651 260 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AL121594.1-201ENST00000475906 575 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNORA70.24-201ENST00000517233 118 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AP000763.2-201ENST00000540641 163 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SNRPGP18-201ENST00000553000 214 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC243960.4-201ENST00000600532 288 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 CLIC4P2-201ENST00000601934 717 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC138749.5-201ENST00000611461 208 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC116165.2-201ENST00000616705 206 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 SCARNA4-202ENST00000625402 129 ntBASIC1.67□□□□□ -2.14
CCDC59Q9P031 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC59Q9P031 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.67□□□□□ -2.14
CCDC59Q9P031 Y_RNA.40-201ENST00000362645 93 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 SNORD115-3-201ENST00000363100 82 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNU5F-7P-201ENST00000363696 115 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNU6-384P-201ENST00000364900 104 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNU6-641P-201ENST00000384006 107 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 SNORA48.2-201ENST00000390926 124 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 AL356432.1-201ENST00000405809 419 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNU2-39P-201ENST00000410604 198 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNU2-48P-201ENST00000410694 191 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNU2-32P-201ENST00000411193 191 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 EIF1AXP1-201ENST00000419267 435 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RPS24P1-201ENST00000438550 371 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 BZW1P2-201ENST00000473537 826 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 RNA5SP356-201ENST00000515972 94 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC59Q9P031 AP003392.2-201ENST00000527269 208 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
CCDC59Q9P031 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC59Q9P031 OR5AL2P-201ENST00000532185 920 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms