Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 MTND5P30-201ENST00000452896 1731 ntBASIC3.35□□□□□ -1.87
RLIMQ9NVW2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.35□□□□□ -1.87
RLIMQ9NVW2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNA5SP515-201ENST00000364570 118 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNU1-100P-201ENST00000365255 165 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNU6-198P-201ENST00000384258 104 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 Y_RNA.463-201ENST00000384271 102 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNU6-692P-201ENST00000384496 107 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 MIR606-201ENST00000384851 96 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNU6-55P-201ENST00000411092 107 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 MTND2P23-201ENST00000422990 651 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RPL7P2-201ENST00000427639 268 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 AL137792.2-201ENST00000443484 235 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 AC034236.1-201ENST00000469891 373 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNU6-699P-201ENST00000517081 110 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 RNU6-988P-201ENST00000519081 107 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 CBX3P8-201ENST00000532412 525 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 CPDP1-201ENST00000579660 283 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 MIR6134-201ENST00000617606 109 ntBASIC3.34□□□□□ -1.87
RLIMQ9NVW2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RLIMQ9NVW2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.88
RLIMQ9NVW2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RLIMQ9NVW2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 MIR30E-201ENST00000362104 92 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.5-201ENST00000362334 102 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 U8.8-201ENST00000365399 135 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AP002088.1-201ENST00000382740 395 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 RNA5SP252-201ENST00000391131 119 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC243428.1-201ENST00000421099 264 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 BPY2DP-201ENST00000422208 265 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AL591043.1-201ENST00000432461 424 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 CYCSP32-201ENST00000440548 321 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC124916.1-201ENST00000444020 547 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 NIPA2P5-201ENST00000452282 464 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 CEACAMP4-201ENST00000457676 421 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 RN7SL132P-201ENST00000478131 296 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC026402.1-201ENST00000513642 170 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 RNU6-327P-201ENST00000516270 127 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC022634.1-201ENST00000520765 532 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC006077.1-201ENST00000604746 343 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC006157.1-201ENST00000611750 366 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 MTND4P1-201ENST00000457501 1466 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC066616.2-201ENST00000559334 1481 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 AC002546.1-201ENST00000588041 2504 ntBASIC3.33□□□□□ -1.88
RLIMQ9NVW2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
RLIMQ9NVW2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC110491.1-201ENST00000562191 2010 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 Y_RNA.112-201ENST00000363250 102 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 U3.6-201ENST00000363622 211 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 RNU6-105P-201ENST00000363909 104 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 SNORA33.2-201ENST00000365413 134 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 FTH1P15-201ENST00000406984 280 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 RNU6-174P-201ENST00000410406 106 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AL160004.2-201ENST00000432935 350 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AL035666.1-201ENST00000446195 348 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 MTND4P19-201ENST00000446659 478 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC012308.1-201ENST00000451232 178 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC013470.1-201ENST00000453438 462 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 MRPL42P6-201ENST00000486397 371 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC068781.1-201ENST00000488231 618 ntBASIC3.32□□□□□ -1.88
RLIMQ9NVW2 AC114801.2-201ENST00000503825 781 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms