Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AL590396.4-201ENST00000636779 956 ntBASIC0.33□□□□□ -2.36
CDC42SE2Q9NRR3 Y_RNA.99-201ENST00000363138 105 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 RNY1P10-201ENST00000363268 113 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-112P-201ENST00000363599 104 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AC007435.1-201ENST00000421086 415 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AL589872.1-201ENST00000426602 288 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 MTND1P28-201ENST00000435623 950 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 USP9YP34-201ENST00000453983 808 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 RPL30P1-201ENST00000488676 339 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 PDCD5P2-201ENST00000507570 312 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 RNA5SP121-201ENST00000516537 101 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 BNIP3P10-201ENST00000605360 577 ntBASIC0.32□□□□□ -2.36
CDC42SE2Q9NRR3 AC138393.1-203ENST00000327086 343 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-819P-201ENST00000364116 107 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 Y_RNA.255-201ENST00000364581 97 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 SNORD114-24-201ENST00000365029 72 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 RPS26P5-201ENST00000418544 335 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AL022400.1-201ENST00000423946 935 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 ACA59.2-201ENST00000517061 156 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AC090142.3-201ENST00000519012 385 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AL158211.4-201ENST00000606988 584 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-91P-201ENST00000607774 107 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AC009229.3-201ENST00000608056 282 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AC096772.1-201ENST00000609146 564 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.31□□□□□ -2.36
CDC42SE2Q9NRR3 AC092447.10-201ENST00000620607 1652 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 MIR19B1-201ENST00000384829 87 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 MIR7-1-201ENST00000384871 110 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-360P-201ENST00000390944 104 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AL133475.1-201ENST00000404414 305 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC092634.6-201ENST00000418558 192 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC114737.2-201ENST00000421583 173 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 SNX2P2-201ENST00000424553 323 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 SNRPEP7-201ENST00000438350 220 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AL078601.1-201ENST00000444542 271 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 MTND1P16-201ENST00000465177 898 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-528P-201ENST00000516926 100 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC015688.6-201ENST00000577737 104 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC005786.1-201ENST00000588553 154 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AL355802.4-201ENST00000607635 548 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC080188.3-201ENST00000624842 748 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC095038.3-201ENST00000634439 195 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 AC068205.3-201ENST00000636385 468 ntBASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CDC42SE2Q9NRR3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 RNA5SP499-201ENST00000363982 119 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 RNU1-39P-201ENST00000383897 165 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-14P-201ENST00000384630 106 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AL592310.1-201ENST00000414330 671 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 MTND2P21-201ENST00000436242 1042 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AL929288.2-201ENST00000446368 407 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC013267.1-201ENST00000458227 267 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC134050.1-201ENST00000495088 933 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-703P-201ENST00000516946 107 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC093249.1-201ENST00000567049 203 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 LARP7P2-201ENST00000575306 125 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 FAM106DP-201ENST00000586416 501 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 VN1R82P-201ENST00000601481 356 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AP003465.2-201ENST00000602571 373 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC011451.2-201ENST00000604303 598 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC112220.2-201ENST00000605513 533 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC034229.4-201ENST00000607861 441 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC040896.1-201ENST00000613819 479 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 AC004009.2-201ENST00000623016 728 ntBASIC0.29□□□□□ -2.36
CDC42SE2Q9NRR3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms