Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.74
PDLIM7Q9NR12 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
PDLIM7Q9NR12 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM7Q9NR12 Y_RNA.26-201ENST00000362539 101 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.33-201ENST00000362591 102 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.64-201ENST00000362845 102 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 RNU6-1167P-201ENST00000363227 94 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.276-201ENST00000364732 109 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 RNU6-806P-201ENST00000365147 105 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.350-201ENST00000365409 98 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.376-201ENST00000365638 108 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.483-201ENST00000384380 101 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.533-201ENST00000384596 114 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 MIR625-201ENST00000385047 85 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 LAP3P1-201ENST00000403648 294 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 U3.42-201ENST00000408746 214 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 AC005326.1-201ENST00000429197 123 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 SNORA25.11-201ENST00000515935 105 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 HSPE1P20-201ENST00000538133 289 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 VN1R91P-201ENST00000594377 169 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 AC004805.2-201ENST00000605382 482 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 AC107294.1-201ENST00000609524 467 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 MIR8057-201ENST00000620957 69 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 MIR6852-201ENST00000621699 66 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 SDAD1P2-201ENST00000441308 2028 ntBASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM7Q9NR12 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 MIR448-201ENST00000362131 111 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 RNU6-1317P-201ENST00000364582 104 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 U8.8-201ENST00000365399 135 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 RNU6-395P-201ENST00000365662 106 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 SNORA51.11-201ENST00000384442 131 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AL603908.1-201ENST00000406098 201 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 SUMO1P2-201ENST00000452524 304 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 RNU6-1037P-201ENST00000459571 107 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 TRBV12-2-201ENST00000489763 344 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AL359273.1-201ENST00000510918 627 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AC004584.2-201ENST00000570407 410 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 MIR3128-201ENST00000581957 66 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AL161798.1-201ENST00000604630 131 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 AL137843.1-201ENST00000605078 385 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 MFSD8-236ENST00000641509 4050 ntBASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PDLIM7Q9NR12 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RPL9P7-201ENST00000330965 580 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 SNORD9-201ENST00000362566 104 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-37P-201ENST00000362692 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-11P-201ENST00000364234 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-7-201ENST00000364784 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-8-201ENST00000365467 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-25P-201ENST00000383873 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-1-201ENST00000383898 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-48P-201ENST00000384161 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-36P-201ENST00000384172 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-4P-201ENST00000384205 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-5P-201ENST00000384238 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-3P-201ENST00000384314 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-16P-201ENST00000384385 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-15P-201ENST00000384534 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-2-201ENST00000384627 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-29P-201ENST00000384637 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-9-201ENST00000384776 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-33P-201ENST00000384793 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 MIR514A1-201ENST00000385133 98 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AL591034.2-201ENST00000402839 359 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU2-38P-201ENST00000410856 79 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AL513043.1-201ENST00000439124 535 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 CEACAMP4-201ENST00000457676 421 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RPL9P9-202ENST00000466501 579 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 NDUFB4P9-201ENST00000511646 388 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms