Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
TM9SF3Q9HD45 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.08
TM9SF3Q9HD45 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 SMIM11P1-201ENST00000369586 178 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AC092809.3-201ENST00000415453 231 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL353777.1-201ENST00000425552 326 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL592045.1-201ENST00000429867 352 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL353689.1-201ENST00000438895 199 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL133217.1-201ENST00000450980 425 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AC005178.1-201ENST00000508392 440 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.6-201ENST00000603753 252 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.11-201ENST00000604059 253 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL022161.1-201ENST00000604390 213 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AC008162.1-201ENST00000604718 254 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.1-201ENST00000604752 252 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.5-201ENST00000605253 252 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.12-201ENST00000605291 253 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.8-201ENST00000605353 252 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AL670379.7-201ENST00000605823 252 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 FRG1KP-201ENST00000623592 341 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AF246928.1-201ENST00000623768 87 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 AC006927.3-201ENST00000638789 384 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TM9SF3Q9HD45 Y_RNA.169-201ENST00000363745 96 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 RAC1P6-201ENST00000423911 575 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AL356583.2-201ENST00000426536 280 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 SRIP2-201ENST00000428470 166 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AL118520.1-201ENST00000450770 291 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 ART2BP-201ENST00000453501 499 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 RPS3AP22-201ENST00000488297 769 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 RNU6-201P-201ENST00000517100 61 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 RNU6-232P-201ENST00000517144 64 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AP003122.4-201ENST00000530980 758 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC002984.1-201ENST00000591692 448 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC243960.4-201ENST00000600532 288 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC063944.3-201ENST00000609969 533 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC007494.3-201ENST00000624660 743 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC092104.1-201ENST00000497346 1441 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 AC103710.2-202ENST00000641454 2853 ntBASIC2.07□□□□□ -2.08
TM9SF3Q9HD45 SNORA25B-201ENST00000365507 128 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 RNU6-898P-201ENST00000365627 104 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 SNORA26.9-201ENST00000391322 122 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 AL356432.1-201ENST00000405809 419 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 MTND5P25-201ENST00000430499 799 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 HMGB1P18-201ENST00000438801 619 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 RNU6-717P-201ENST00000459076 104 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 BZW1P2-201ENST00000473537 826 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 AC109486.1-201ENST00000486833 374 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 RN7SKP219-201ENST00000516825 296 ntBASIC2.06□□□□□ -2.08
TM9SF3Q9HD45 OR5AQ1P-201ENST00000527596 927 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms