Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6-1208P-201ENST00000459588 107 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 DYNLL1P5-201ENST00000467158 270 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC003982.1-202ENST00000469928 248 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC022493.1-201ENST00000492984 337 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 Y_RNA.654-201ENST00000497848 106 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC006445.2-201ENST00000510061 472 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC046134.1-201ENST00000514454 666 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 RNU6-189P-201ENST00000516120 101 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 RNU6-1282P-201ENST00000516735 96 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC025755.1-201ENST00000521306 278 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AP003122.3-201ENST00000526316 255 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC084851.1-201ENST00000529105 249 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 OR11H5P-201ENST00000554039 926 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 MIR3605-201ENST00000583214 100 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 UBE2V2P2-201ENST00000587677 504 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC073539.2-201ENST00000597113 165 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 VN1R80P-201ENST00000597126 338 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC093732.2-201ENST00000607950 274 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 Z82243.1-201ENST00000609432 473 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AL121757.2-201ENST00000611223 313 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
PCDH9Q9HC56 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCDH9Q9HC56 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC092593.1-201ENST00000515413 1815 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RPL21P75-201ENST00000396599 483 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RPS4XP3-201ENST00000398541 413 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RPL21P28-201ENST00000401418 483 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC007560.1-201ENST00000426912 237 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AL513043.1-201ENST00000439124 535 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AL360271.2-201ENST00000447710 161 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AL031183.1-201ENST00000457667 207 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RPL21P39-201ENST00000463605 483 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RPS29P26-201ENST00000477483 171 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC087190.1-201ENST00000484462 480 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC093591.1-201ENST00000491435 481 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RPL21P16-201ENST00000495531 483 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 HIGD1AP13-201ENST00000509878 289 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RNU4-49P-201ENST00000516080 140 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RNU6-875P-201ENST00000516488 106 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 RNU6-273P-201ENST00000516937 96 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 HPRT1P3-201ENST00000539521 576 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 PSMA3P-201ENST00000555485 635 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.91□□□□□ -1.94
PCDH9Q9HC56 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PCDH9Q9HC56 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 RNU6-395P-201ENST00000365662 106 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 MIR483-201ENST00000385070 76 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 SNORA26.7-201ENST00000391288 122 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AL645937.1-202ENST00000421799 937 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AL139132.1-201ENST00000431587 344 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 SNRPEP8-201ENST00000442866 260 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 NIPA2P5-201ENST00000452282 464 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 RNU7-167P-201ENST00000459160 62 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AC023043.3-201ENST00000593113 385 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AC005000.2-201ENST00000605468 310 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AL357078.3-201ENST00000607528 618 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 AC022418.1-201ENST00000624118 445 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 U6.99-201ENST00000637524 83 ntBASIC2.9□□□□□ -1.95
PCDH9Q9HC56 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDH9Q9HC56 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 RNU6-845P-201ENST00000362578 103 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 SNORD3E-201ENST00000362899 217 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.100-201ENST00000363141 102 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 RNU6-82P-201ENST00000363970 107 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 SNORA75B-201ENST00000384053 137 ntBASIC2.89□□□□□ -1.95
PCDH9Q9HC56 RNU6-217P-201ENST00000384164 104 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms