Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3LQ9H3M9 AC233981.2-201ENST00000611524 1614 ntBASIC4.31□□□□□ -1.72
ATXN3LQ9H3M9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATXN3LQ9H3M9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.31□□□□□ -1.72
ATXN3LQ9H3M9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ATXN3LQ9H3M9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATXN3LQ9H3M9 AC090740.1-201ENST00000623193 2262 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 RNU4-9P-201ENST00000364951 139 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 AL691449.1-201ENST00000426570 421 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 NDUFB4P10-201ENST00000452541 359 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 AC010265.1-201ENST00000513509 211 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 MIR4429-201ENST00000580105 73 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 AC006133.1-201ENST00000617106 264 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 MIR7151-201ENST00000617477 60 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 AL592437.2-201ENST00000421655 2434 ntBASIC4.3□□□□□ -1.72
ATXN3LQ9H3M9 AL592182.3-201ENST00000642132 3304 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AC009541.1-201ENST00000438279 2662 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 Y_RNA.506-201ENST00000384494 102 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 MTATP6P29-201ENST00000415057 132 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 COX6CP10-201ENST00000416832 224 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AL356867.1-201ENST00000429623 299 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 PPBPP1-201ENST00000510807 373 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 SNORA67.7-201ENST00000516664 135 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 RNU6-1212P-201ENST00000517023 104 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AP006245.1-201ENST00000522549 120 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 MIR3158-1-201ENST00000583596 81 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AC005255.1-201ENST00000593748 216 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 MIR7154-201ENST00000620673 73 ntBASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATXN3LQ9H3M9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 AC016588.2-201ENST00000632484 3021 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 SNORA60-201ENST00000362396 134 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RNU4-90P-201ENST00000362773 141 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RNU6-335P-201ENST00000364563 113 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RNU6-72P-201ENST00000384285 79 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RNA5SP146-201ENST00000410743 123 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RNU2-68P-201ENST00000410878 191 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 HLA-N-201ENST00000437516 135 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 AC009296.1-201ENST00000443146 155 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 AC091153.1-201ENST00000466297 402 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RPS26P28-201ENST00000470806 348 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 HMGB1P22-201ENST00000505315 124 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 HSPE1P5-201ENST00000561489 272 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 MIR5685-201ENST00000579080 79 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 SNRPGP15-201ENST00000600149 222 ntBASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATXN3LQ9H3M9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 Y_RNA.44-201ENST00000362676 108 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-1159P-201ENST00000362933 107 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-682P-201ENST00000363843 106 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-105P-201ENST00000363909 104 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-741P-201ENST00000383889 107 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 RNU6-968P-201ENST00000384076 107 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 AL033519.2-201ENST00000403958 392 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 AC098614.2-201ENST00000426040 255 ntBASIC4.27□□□□□ -1.73
ATXN3LQ9H3M9 AL606753.1-201ENST00000427435 87 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms