Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX47Q9H0S4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.31□□□□□ -2.04
DDX47Q9H0S4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AP000568.1-201ENST00000282964 442 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 RNU6-371P-201ENST00000364283 108 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 RNU6-384P-201ENST00000364900 104 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 Y_RNA.367-201ENST00000365544 101 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 Y_RNA.576-201ENST00000384781 102 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 RNU6-387P-201ENST00000411331 105 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 CALM2P2-201ENST00000428512 440 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 CALM1P1-201ENST00000442082 433 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 RNA5SP269-201ENST00000459032 137 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 MTAPP1-201ENST00000489154 819 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC140059.1-201ENST00000489238 361 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 RANP3-201ENST00000530970 276 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC136619.2-201ENST00000563361 631 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 MTCYBP33-201ENST00000575007 1130 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 BNIP3P30-201ENST00000601184 574 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AL670379.4-201ENST00000605279 254 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 AC006020.1-201ENST00000420179 1854 ntBASIC2.3□□□□□ -2.04
DDX47Q9H0S4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
DDX47Q9H0S4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 OR56A5-201ENST00000340110 738 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 RNU4-91P-201ENST00000364778 135 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 MIR524-201ENST00000385242 87 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 RNU6-248P-201ENST00000410720 107 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 EIF4EP4-201ENST00000424916 578 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 RPL31P35-201ENST00000431058 377 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 MTCO3P5-201ENST00000433620 714 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 RNU6-717P-201ENST00000459076 104 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 HMGB1P30-201ENST00000492455 606 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC114781.4-201ENST00000513707 639 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 RNU6-410P-201ENST00000517006 107 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AP003072.2-201ENST00000527756 676 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC009127.3-201ENST00000570531 403 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC137800.2-201ENST00000574375 120 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC098848.2-201ENST00000588023 330 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 CLIC4P2-201ENST00000601934 717 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 Z94722.1-201ENST00000604328 474 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC064872.1-201ENST00000604823 1072 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC026790.2-201ENST00000606282 430 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 U4atac.1-201ENST00000618345 95 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 MIR203B-201ENST00000636080 86 ntBASIC2.29□□□□□ -2.04
DDX47Q9H0S4 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.29□□□□□ -2.04
DDX47Q9H0S4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.28□□□□□ -2.04
DDX47Q9H0S4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.04
DDX47Q9H0S4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
DDX47Q9H0S4 U3.4-201ENST00000363352 213 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 SNORD115-7-201ENST00000365306 82 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RNU6-843P-201ENST00000384454 104 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RPL21P90-201ENST00000415692 466 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.28□□□□□ -2.04
DDX47Q9H0S4 AC000111.3-201ENST00000433478 193 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 GPR143P-201ENST00000434155 205 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 AC104058.1-201ENST00000448028 297 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RPL23AP7-203ENST00000449021 469 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 AC117503.1-201ENST00000472241 394 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 AC090255.1-201ENST00000495779 349 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RN7SL636P-201ENST00000497504 294 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RNU1-86P-201ENST00000516108 154 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 Y_RNA.687-201ENST00000516558 91 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 RNU1-107P-201ENST00000516617 154 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 SNORA18.6-201ENST00000516792 115 ntBASIC2.28□□□□□ -2.04
DDX47Q9H0S4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.28□□□□□ -2.04
DDX47Q9H0S4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms