Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RPL31P3-201ENST00000458430 332 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 snoU109.1-201ENST00000459339 135 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 SNORD42A-201ENST00000459584 64 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 MTCO2P29-201ENST00000465212 189 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 RPL9P6-201ENST00000492764 598 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 AC091965.2-201ENST00000512324 613 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 Y_RNA.695-201ENST00000516715 107 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 SNORA31.19-201ENST00000517079 126 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 AC009902.1-201ENST00000519351 183 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 AL157871.3-201ENST00000557231 293 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 AC091304.9-201ENST00000612091 226 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 MIR5739-201ENST00000619803 80 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 Z75746.1-201ENST00000440243 2080 ntBASIC2.35□□□□□ -2.03
CCSER1Q9C0I3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RNA5SP37-201ENST00000365420 130 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RNU6-946P-201ENST00000383878 107 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 SNORA40.3-201ENST00000390964 122 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 SNORA40C-201ENST00000391285 128 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RNU2-8P-201ENST00000410727 190 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RN7SKP284-201ENST00000411002 343 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AL589872.1-201ENST00000426602 288 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC119618.1-201ENST00000434191 222 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC016691.1-201ENST00000441321 413 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RPL7P12-201ENST00000446719 750 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC025033.1-201ENST00000463883 194 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 CKS1BP2-201ENST00000497342 240 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC093534.1-201ENST00000504977 132 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC010587.1-201ENST00000505809 469 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC109927.2-201ENST00000506416 303 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC117532.1-201ENST00000514638 323 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 RNU2-46P-201ENST00000517038 113 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 PIGPP4-201ENST00000584447 307 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AL451064.1-201ENST00000607718 471 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC096772.1-201ENST00000609146 564 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 MIR6873-201ENST00000622788 63 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 AC009487.4-201ENST00000624969 3585 ntBASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCSER1Q9C0I3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 RNA5SP125-201ENST00000364843 120 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 RN7SKP158-201ENST00000410453 326 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL109913.1-201ENST00000421173 514 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 WARS2P1-201ENST00000429678 537 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC004383.1-201ENST00000438135 289 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC124916.1-201ENST00000444020 547 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL021397.1-201ENST00000451806 248 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 RNA5SP337-201ENST00000517007 109 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 IGKV3-31-201ENST00000523109 329 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC012213.3-201ENST00000577199 777 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AP005136.1-201ENST00000579765 429 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 MIR3682-201ENST00000581338 84 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL670379.10-201ENST00000604330 253 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL670379.9-201ENST00000605428 253 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC087752.4-201ENST00000605911 462 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC116312.1-201ENST00000606841 314 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC097065.2-201ENST00000608159 533 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC008250.2-201ENST00000615261 205 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AP001506.1-201ENST00000615444 211 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AL359547.2-201ENST00000615810 418 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 AC138627.2-201ENST00000624202 601 ntBASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CCSER1Q9C0I3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCSER1Q9C0I3 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
CCSER1Q9C0I3 OR56A5-201ENST00000340110 738 ntBASIC2.32□□□□□ -2.04
CCSER1Q9C0I3 RNU5E-1-201ENST00000362477 120 ntBASIC2.32□□□□□ -2.04
CCSER1Q9C0I3 U8.3-201ENST00000363321 132 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms