Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ISCA1P1-201ENST00000426679 387 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 ARPC3P5-201ENST00000448802 534 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC008379.1-201ENST00000463655 464 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 RNU6-1183P-201ENST00000517054 60 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC087854.1-201ENST00000519706 414 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC022784.5-201ENST00000522241 437 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 DPPA3P3-201ENST00000603842 430 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC021646.1-201ENST00000605469 484 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC034229.4-201ENST00000607861 441 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.25□□□□□ -2.21
TRIM4Q9C037 AC097460.3-201ENST00000623099 442 ntBASIC1.25□□□□□ -2.21
TRIM4Q9C037 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 MIR29C-201ENST00000385231 88 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 RNU11-3P-201ENST00000391111 133 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRIM4Q9C037 RNU2-42P-201ENST00000410697 113 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 USP9YP26-201ENST00000421008 661 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 C1DP1-201ENST00000426049 402 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 CALM1P1-201ENST00000442082 433 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 AC116655.1-201ENST00000508324 901 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 RN7SKP265-201ENST00000516448 223 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 AC084364.2-201ENST00000546924 395 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 OR6C7P-201ENST00000547875 934 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 HIGD1AP17-201ENST00000554576 276 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 AC023825.1-201ENST00000566704 1030 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 MTATP6P3-201ENST00000581686 676 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 AL353997.4-201ENST00000586196 166 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 AL583856.2-201ENST00000606298 543 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.24□□□□□ -2.21
TRIM4Q9C037 CDR1-202ENST00000625883 1485 ntBASIC1.24□□□□□ -2.21
TRIM4Q9C037 RNU6-512P-201ENST00000364438 103 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 MIR597-201ENST00000384968 97 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 RNA5SP501-201ENST00000410990 112 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 RPS12P24-201ENST00000412619 387 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 OR51A5P-201ENST00000415429 942 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 MTND5P25-201ENST00000430499 799 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 GTF2IP3-201ENST00000433887 494 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AL158053.1-201ENST00000441503 453 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 HMGN2P18-201ENST00000450680 270 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 HMGB1P28-201ENST00000507778 552 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 SLC2A13P1-201ENST00000531560 322 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC109446.2-201ENST00000567872 497 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 MIR3660-201ENST00000584845 100 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC021171.1-201ENST00000603137 706 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC016727.2-201ENST00000603988 621 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 AC087045.1-201ENST00000605856 382 ntBASIC1.23□□□□□ -2.21
TRIM4Q9C037 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRIM4Q9C037 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 RNU6-1280P-201ENST00000365211 107 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 RNU6-203P-201ENST00000384038 104 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 RNU1-139P-201ENST00000391307 165 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 MIR1262-201ENST00000408276 93 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 MTCO1P3-201ENST00000429327 192 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 MTND4P6-201ENST00000438297 472 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 MTCO3P43-201ENST00000440974 771 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 AC079776.3-201ENST00000450665 370 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 RNU6-775P-201ENST00000459318 96 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 AC010631.1-201ENST00000474150 156 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 RNU6-583P-201ENST00000516012 92 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM4Q9C037 MIR6134-201ENST00000617606 109 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 U1.36-201ENST00000620684 176 ntBASIC1.22□□□□□ -2.21
TRIM4Q9C037 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 RNU5B-1-201ENST00000363286 116 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.21□□□□□ -2.22
TRIM4Q9C037 RNU2-48P-201ENST00000410694 191 ntBASIC1.21□□□□□ -2.22
TRIM4Q9C037 MTCO2P20-201ENST00000437339 673 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms