Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AC103987.3-201ENST00000582071 292 ntBASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 AC060766.3-201ENST00000591442 263 ntBASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 AC007621.1-201ENST00000604544 437 ntBASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 CTSLP2-204ENST00000629029 392 ntBASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.44□□□□□ -2.02
CCM2Q9BSQ5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 RNU6-371P-201ENST00000364283 108 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 RNU4-75P-201ENST00000364621 146 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 Y_RNA.318-201ENST00000365131 97 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 RNU6-259P-201ENST00000383999 107 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 RNU6-606P-201ENST00000384721 111 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 MIR10A-201ENST00000385043 110 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 MIR147B-201ENST00000390185 80 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AC068050.1-201ENST00000394891 380 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AL359511.1-201ENST00000402970 211 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 RNU2-16P-201ENST00000410712 136 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 EEF1A1P40-201ENST00000412883 573 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 PTGES3P4-201ENST00000426243 356 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 CR769767.1-201ENST00000436337 346 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AL513328.1-201ENST00000446460 224 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 UBE2DNL-203ENST00000474922 222 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 OR1M4P-201ENST00000589199 287 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AL391813.1-201ENST00000603098 260 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AL391646.1-201ENST00000603860 190 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AC091152.3-201ENST00000604227 325 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 MIR6134-201ENST00000617606 109 ntBASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CCM2Q9BSQ5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 MTND5P26-201ENST00000426018 1752 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL139276.1-201ENST00000311910 1001 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 MIR6073-201ENST00000352083 89 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 SNORA68.1-201ENST00000364537 132 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 Y_RNA.381-201ENST00000365666 102 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 RNU6-1103P-201ENST00000384150 107 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 MIR518C-201ENST00000384822 101 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC010975.2-201ENST00000427781 588 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL627311.1-201ENST00000431514 115 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 MTCO2P7-201ENST00000446518 666 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 SNORA59A-201ENST00000459326 152 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC133134.1-201ENST00000466800 359 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL121769.1-201ENST00000469473 401 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 MRPL42P6-201ENST00000486397 371 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 HMGB1P29-201ENST00000505659 499 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 HMGB3P3-201ENST00000510526 400 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC091133.4-201ENST00000511142 308 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 RNU6-1178P-201ENST00000516674 107 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 MIR4703-201ENST00000577728 79 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AC008752.3-201ENST00000588113 712 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL136363.2-201ENST00000604173 851 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AP001486.3-201ENST00000615334 372 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AL158209.2-201ENST00000619266 216 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 OR5AK4P-201ENST00000635912 903 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.42□□□□□ -2.02
CCM2Q9BSQ5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 OR4G2P-201ENST00000328113 903 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 RNU6-858P-201ENST00000362436 107 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 U3.12-201ENST00000364498 214 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 RN7SKP226-201ENST00000364912 300 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 AL162578.1-201ENST00000406202 378 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 MTCO3P41-201ENST00000414801 328 ntBASIC2.41□□□□□ -2.02
CCM2Q9BSQ5 AC016831.2-201ENST00000417179 352 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms