Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC073539.2-201ENST00000597113 165 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 AL158032.1-201ENST00000605401 106 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 AC087045.1-201ENST00000605856 382 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 AC080013.6-201ENST00000606185 215 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 AC009090.3-201ENST00000616553 565 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 AC024581.2-201ENST00000619986 252 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 ADAM3A-203ENST00000461344 2157 ntBASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.86□□□□□ -2.11
HDHD3Q9BSH5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 SNORA5B-201ENST00000363786 132 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 SNORA62.1-201ENST00000364287 154 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 RNU4-48P-201ENST00000365559 182 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 MIR221-201ENST00000385135 110 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 OR6C66P-201ENST00000414917 930 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 PTGES3P4-201ENST00000426243 356 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC007560.1-201ENST00000426912 237 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC006946.1-201ENST00000429106 328 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 DNAJC19P4-201ENST00000440115 345 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AL031659.1-201ENST00000447075 539 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC011005.2-201ENST00000487324 359 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 MTND2P33-201ENST00000506452 1031 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 HMGB3P3-201ENST00000510526 400 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 RNA5SP24-201ENST00000516478 95 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 ACA59.2-201ENST00000517061 156 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 OR5AL2P-201ENST00000532185 920 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC092325.1-201ENST00000566449 554 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AL391840.1-201ENST00000571144 367 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 MIR548AC-201ENST00000585049 88 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 NRBF2P5-201ENST00000603087 788 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HDHD3Q9BSH5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AL109809.4-201ENST00000603520 2185 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU1-72P-201ENST00000362976 153 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 U3.12-201ENST00000364498 214 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU6-1083P-201ENST00000384022 107 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU6-1029P-201ENST00000384109 107 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU6-72P-201ENST00000384285 79 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 SNORA67.4-201ENST00000384688 142 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU6-606P-201ENST00000384721 111 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU6-220P-201ENST00000390919 107 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 Y_RNA.582-201ENST00000391023 95 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RPS4XP8-201ENST00000402039 771 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 FTH1P15-201ENST00000406984 280 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNU6-607P-201ENST00000411283 108 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 CYCSP33-201ENST00000414485 327 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 USP9YP14-201ENST00000430663 563 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AL627311.1-201ENST00000431514 115 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AL445687.1-201ENST00000439946 251 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 HIGD1AP2-201ENST00000446367 280 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC104058.1-201ENST00000448028 297 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 snoU13.22-201ENST00000459428 104 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC108078.1-201ENST00000508073 725 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC104806.1-201ENST00000508720 308 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 RNA5SP281-201ENST00000516504 135 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 MIR4658-201ENST00000584344 65 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 NBR2-204ENST00000587322 63 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC068790.2-201ENST00000602601 557 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 uc_338.14-201ENST00000613162 166 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC048344.4-201ENST00000619744 527 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.84□□□□□ -2.11
HDHD3Q9BSH5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HDHD3Q9BSH5 Z82209.1-201ENST00000422141 2135 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms