Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 RNU6-384P-201ENST00000364900 104 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 MT-TD-201ENST00000387419 68 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 AC007390.1-201ENST00000415722 356 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 SKA2P1-201ENST00000425592 390 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 RPL7P43-201ENST00000478876 753 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 SNORA31.1-201ENST00000515993 133 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 SNORA31.5-201ENST00000516190 133 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 RNU6-711P-201ENST00000517255 106 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 AL391261.3-201ENST00000557194 520 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 MIR4474-201ENST00000579189 78 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 AC005261.5-201ENST00000596280 355 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 uc_338.15-201ENST00000615470 191 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 U2.21-201ENST00000637295 81 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 AC000403.1-201ENST00000613696 3585 ntBASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PAAF1Q9BRP4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC138393.1-203ENST00000327086 343 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL356432.1-201ENST00000405809 419 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 RAP1BP3-201ENST00000407180 549 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 RHEBP3-201ENST00000411920 351 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 NCOR1P3-201ENST00000420479 303 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC022018.1-201ENST00000430685 241 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL135938.1-201ENST00000443141 297 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AL031183.1-201ENST00000457667 207 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 HMGN2P13-201ENST00000476476 274 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 APOOP1-201ENST00000604695 592 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC104237.2-201ENST00000612456 443 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 AC104985.2-201ENST00000620598 500 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 PWAR6-201ENST00000552334 4618 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 ADAM3A-203ENST00000461344 2157 ntBASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
PAAF1Q9BRP4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.21□□□□□ -1.89
PAAF1Q9BRP4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-37P-201ENST00000362692 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-11P-201ENST00000364234 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 Y_RNA.263-201ENST00000364659 114 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-7-201ENST00000364784 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-8-201ENST00000365467 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-898P-201ENST00000365627 104 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-25P-201ENST00000383873 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-1-201ENST00000383898 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-128P-201ENST00000383976 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-48P-201ENST00000384161 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-36P-201ENST00000384172 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-4P-201ENST00000384205 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-5P-201ENST00000384238 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-3P-201ENST00000384314 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-16P-201ENST00000384385 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-15P-201ENST00000384534 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-2-201ENST00000384627 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-29P-201ENST00000384637 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-9-201ENST00000384776 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-33P-201ENST00000384793 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-1106P-201ENST00000390845 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 AL139396.1-201ENST00000421137 167 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 HMGB1P18-201ENST00000438801 619 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 MTND3P22-201ENST00000510932 243 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RPL39P5-202ENST00000512505 151 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RN7SKP132-201ENST00000516001 208 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 CYCSP39-201ENST00000565821 309 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 FGF7P1-201ENST00000582820 288 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 MIR3672-201ENST00000584290 82 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 AC021646.1-201ENST00000605469 484 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 RNU6-6P-201ENST00000606623 107 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 AL591516.1-201ENST00000611326 274 ntBASIC3.21□□□□□ -1.9
PAAF1Q9BRP4 PLCE1P1-201ENST00000622094 305 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms