Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
USB1Q9BQ65 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
USB1Q9BQ65 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USB1Q9BQ65 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
USB1Q9BQ65 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
USB1Q9BQ65 RNU6-1082P-201ENST00000364574 107 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USB1Q9BQ65 AL591034.1-201ENST00000407447 340 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 RNU4-43P-201ENST00000410628 137 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AL591419.1-201ENST00000427423 339 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 RPL7AP49-201ENST00000429522 581 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 TOMM22P2-201ENST00000430735 237 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AL591438.1-201ENST00000433508 581 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 LINC02210-201ENST00000444561 288 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.78□□□□□ -1.64
USB1Q9BQ65 RPS29P20-201ENST00000489592 171 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.78□□□□□ -1.64
USB1Q9BQ65 RNA5SP154-201ENST00000516193 111 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 Y_RNA.694-201ENST00000516677 117 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 RNU1-117P-201ENST00000517041 158 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AC021739.1-201ENST00000559631 174 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AC027176.1-201ENST00000560204 514 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.78□□□□□ -1.64
USB1Q9BQ65 MIR6133-201ENST00000617057 108 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 OR14L1P-202ENST00000641545 3009 ntBASIC4.78□□□□□ -1.64
USB1Q9BQ65 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
USB1Q9BQ65 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.78□□□□□ -1.64
USB1Q9BQ65 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
USB1Q9BQ65 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 AP000542.2-201ENST00000623199 6179 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 RNA5SP326-201ENST00000363209 110 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC068538.1-201ENST00000376856 336 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 SNORA70.6-201ENST00000383934 134 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 RNA5SP339-201ENST00000390987 122 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 SNORA48.5-201ENST00000391143 135 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC004866.1-201ENST00000411748 78 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 RNU5F-2P-201ENST00000516066 82 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC126177.5-201ENST00000549599 178 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 HSPE1P5-201ENST00000561489 272 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 RN7SL356P-201ENST00000582228 248 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC109583.2-201ENST00000617367 129 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 AC068647.2-201ENST00000637380 353 ntBASIC4.77□□□□□ -1.65
USB1Q9BQ65 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USB1Q9BQ65 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
USB1Q9BQ65 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 RNU6-597P-201ENST00000365620 102 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
USB1Q9BQ65 RNY3P5-201ENST00000384127 102 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 PTMAP5-201ENST00000393073 333 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 RNU6-383P-201ENST00000410864 94 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 BX510359.3-201ENST00000422168 306 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 SRSF1P1-201ENST00000424058 520 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 AC004386.2-201ENST00000441858 148 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 RNU6-844P-201ENST00000517175 102 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 AC025281.1-201ENST00000567026 265 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 MIR1269B-201ENST00000580405 75 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 TCL6_2.1-201ENST00000615162 119 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 LINC00901.1-201ENST00000617252 152 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 AC005562.2-201ENST00000618264 111 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 U6.115-201ENST00000636045 103 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.76□□□□□ -1.65
USB1Q9BQ65 ZNF137P-201ENST00000456718 1920 ntBASIC4.76□□□□□ -1.65
USB1Q9BQ65 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USB1Q9BQ65 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USB1Q9BQ65 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USB1Q9BQ65 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 AL512604.1-201ENST00000404812 257 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 MIR1178-201ENST00000408396 91 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 MIR1271-201ENST00000408537 86 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms