Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 AC016831.2-201ENST00000417179 352 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 C1DP2-201ENST00000418167 426 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AL353621.1-201ENST00000418219 243 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 MORF4L1P6-201ENST00000418771 268 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.09□□□□□ -2.07
CITED1Q99966 AL365338.1-201ENST00000422282 858 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 CALM2P2-201ENST00000428512 440 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AL627311.1-201ENST00000431514 115 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.09□□□□□ -2.07
CITED1Q99966 GPM6BP3-201ENST00000442797 145 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.09□□□□□ -2.07
CITED1Q99966 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.09□□□□□ -2.07
CITED1Q99966 AC011005.2-201ENST00000487324 359 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 ANXA2P1-201ENST00000505539 926 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.09□□□□□ -2.07
CITED1Q99966 AC112206.3-201ENST00000514578 389 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.09□□□□□ -2.07
CITED1Q99966 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.09□□□□□ -2.07
CITED1Q99966 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.09□□□□□ -2.07
CITED1Q99966 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.09□□□□□ -2.07
CITED1Q99966 AC118273.2-201ENST00000532092 465 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.09□□□□□ -2.07
CITED1Q99966 ZNF861P-201ENST00000588126 639 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC040904.1-201ENST00000590850 223 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC078899.2-201ENST00000595282 212 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AL670379.10-201ENST00000604330 253 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AL670379.9-201ENST00000605428 253 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC009233.1-201ENST00000616477 371 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 AC092656.1-203ENST00000624134 423 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CITED1Q99966 Z75746.1-201ENST00000440243 2080 ntBASIC2.09□□□□□ -2.07
CITED1Q99966 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.08
CITED1Q99966 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CITED1Q99966 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CITED1Q99966 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CITED1Q99966 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CITED1Q99966 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CITED1Q99966 SNORA75B-201ENST00000384053 137 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 Y_RNA.576-201ENST00000384781 102 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 MIR10A-201ENST00000385043 110 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 RNA5SP210-201ENST00000391034 120 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AL356057.3-201ENST00000402607 340 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 FTH1P15-201ENST00000406984 280 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.08□□□□□ -2.08
CITED1Q99966 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.08□□□□□ -2.08
CITED1Q99966 AC098826.1-201ENST00000433943 471 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AL353706.1-201ENST00000436728 494 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC244505.5-201ENST00000443639 207 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CITED1Q99966 snoU109.2-201ENST00000459316 135 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.08□□□□□ -2.08
CITED1Q99966 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.08□□□□□ -2.08
CITED1Q99966 AC104806.1-201ENST00000508720 308 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 RNA5SP282-201ENST00000516355 108 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 Y_RNA.695-201ENST00000516715 107 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 RPL7P20-201ENST00000520308 745 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.08□□□□□ -2.08
CITED1Q99966 OR5AQ1P-201ENST00000527596 927 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 OR5AL2P-201ENST00000532185 920 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.08□□□□□ -2.08
CITED1Q99966 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.08□□□□□ -2.08
CITED1Q99966 MIR5692A1-201ENST00000580523 69 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 BNIP3P10-201ENST00000605360 577 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC104237.2-201ENST00000612456 443 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 AC010338.1-201ENST00000621823 717 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CITED1Q99966 MIR3974-201ENST00000637126 96 ntBASIC2.08□□□□□ -2.08
CITED1Q99966 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
CITED1Q99966 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CITED1Q99966 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
CITED1Q99966 MTND5P17-201ENST00000418405 1603 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 SNORD3E-201ENST00000362899 217 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 RNU1-72P-201ENST00000362976 153 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 RNA5SP240-201ENST00000365355 128 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 RNU6-116P-201ENST00000384042 109 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 MIR592-201ENST00000384959 97 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 U3.37-201ENST00000408528 213 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 RPL21P90-201ENST00000415692 466 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 MTND3P17-201ENST00000416968 344 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 AC090960.1-201ENST00000421072 306 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 AC097463.2-201ENST00000421074 142 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 TOMM20P4-201ENST00000427861 435 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 CR769767.1-201ENST00000436337 346 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.07□□□□□ -2.08
CITED1Q99966 RPL7P12-201ENST00000446719 750 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 MTCYBP1-201ENST00000454315 1119 ntBASIC2.07□□□□□ -2.08
CITED1Q99966 RPL21P41-201ENST00000459863 264 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms