Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC244517.12-201ENST00000623581 663 ntBASIC3.17□□□□□ -1.9
MEIS3Q99687 SCARNA15.3-201ENST00000626315 122 ntBASIC3.17□□□□□ -1.9
MEIS3Q99687 SCARNA4.1-201ENST00000628597 123 ntBASIC3.17□□□□□ -1.9
MEIS3Q99687 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MEIS3Q99687 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
MEIS3Q99687 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
MEIS3Q99687 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MEIS3Q99687 MTND4P1-201ENST00000457501 1466 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 Y_RNA.146-201ENST00000363549 102 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.16□□□□□ -1.9
MEIS3Q99687 SNORA22B-201ENST00000383876 138 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 Y_RNA.530-201ENST00000384587 101 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 MIR135A2-201ENST00000384854 100 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 MIR27B-201ENST00000385129 97 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 RPL21P24-201ENST00000413752 448 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.16□□□□□ -1.9
MEIS3Q99687 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC005517.2-201ENST00000424673 553 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.16□□□□□ -1.9
MEIS3Q99687 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.16□□□□□ -1.9
MEIS3Q99687 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.16□□□□□ -1.9
MEIS3Q99687 MTCO3P10-201ENST00000455912 772 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC010631.1-201ENST00000474150 156 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.16□□□□□ -1.9
MEIS3Q99687 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.16□□□□□ -1.9
MEIS3Q99687 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.16□□□□□ -1.9
MEIS3Q99687 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 RNU6-1092P-201ENST00000516955 87 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.16□□□□□ -1.9
MEIS3Q99687 AL137161.1-201ENST00000532231 390 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
MEIS3Q99687 MIR4790-201ENST00000577799 79 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC008521.1-201ENST00000587471 187 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.16□□□□□ -1.9
MEIS3Q99687 AC008162.1-201ENST00000604718 254 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AL670379.4-201ENST00000605279 254 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 AC243829.7-201ENST00000633081 225 ntBASIC3.16□□□□□ -1.9
MEIS3Q99687 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
MEIS3Q99687 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.15□□□□□ -1.9
MEIS3Q99687 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
MEIS3Q99687 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MEIS3Q99687 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 Y_RNA.111-201ENST00000363248 100 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 SNORA33.2-201ENST00000365413 134 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNU6-946P-201ENST00000383878 107 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 Y_RNA.459-201ENST00000384251 102 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNU6-1160P-201ENST00000384546 104 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNA5SP219-201ENST00000390940 113 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNA5SP56-201ENST00000410277 118 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 POLHP1-201ENST00000411806 470 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC092809.3-201ENST00000415453 231 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 BEND7P1-201ENST00000422058 457 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 PMCHL1-202ENST00000423102 261 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RPS15AP27-201ENST00000449183 343 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 FABP5P13-201ENST00000452144 328 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RPL30P15-201ENST00000457129 321 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 SCARNA18-201ENST00000459004 134 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 MIR2053-201ENST00000459295 91 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AP000873.1-201ENST00000463987 400 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC104472.2-201ENST00000469035 601 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.15□□□□□ -1.91
MEIS3Q99687 AC090096.1-201ENST00000489168 390 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC091885.1-201ENST00000506658 268 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.15□□□□□ -1.91
MEIS3Q99687 AC093303.1-201ENST00000514549 295 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNU6-123P-201ENST00000516163 102 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNU6-566P-201ENST00000516790 107 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 RNU6-1137P-201ENST00000517073 99 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.15□□□□□ -1.91
MEIS3Q99687 AP000889.2-201ENST00000532684 490 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC006504.6-201ENST00000590142 199 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AL669831.4-202ENST00000590817 238 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AL031176.1-201ENST00000604554 466 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AL158032.1-201ENST00000605401 106 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 AC019193.3-201ENST00000609144 554 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.15□□□□□ -1.91
MEIS3Q99687 CUL1P1-201ENST00000509510 2425 ntBASIC3.15□□□□□ -1.91
MEIS3Q99687 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
MEIS3Q99687 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MEIS3Q99687 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 RNU6-1127P-201ENST00000384580 107 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AL109755.1-201ENST00000401791 649 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 NDUFS5P1-201ENST00000405668 289 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 MIR1250-201ENST00000408098 113 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 RPL37P10-201ENST00000412884 288 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.14□□□□□ -1.91
MEIS3Q99687 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.14□□□□□ -1.91
MEIS3Q99687 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
MEIS3Q99687 SKA2P1-201ENST00000425592 390 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.14□□□□□ -1.91
MEIS3Q99687 CKS1BP5-201ENST00000434172 273 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AC107399.1-201ENST00000451226 265 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 TRBV1-201ENST00000476502 284 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.14□□□□□ -1.91
MEIS3Q99687 Y_RNA.654-201ENST00000497848 106 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 AC021146.2-201ENST00000504736 556 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 RNU6-256P-201ENST00000516747 97 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 RNA5SP454-201ENST00000517231 127 ntBASIC3.14□□□□□ -1.91
MEIS3Q99687 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms