Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RPL21P5-201ENST00000554662 472 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 BNIP3P27-201ENST00000599991 412 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 CLIC4P2-201ENST00000601934 717 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 DPPA3P3-201ENST00000603842 430 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
LYSMD1Q96S90 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
LYSMD1Q96S90 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 SNORD114-19-201ENST00000363072 75 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 Y_RNA.164-201ENST00000363709 102 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 MIR618-201ENST00000385287 98 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 RPL21P90-201ENST00000415692 466 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 TOMM22P2-201ENST00000430735 237 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 CALM1P1-201ENST00000442082 433 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 RN7SKP258-201ENST00000517151 304 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 COPS8P3-201ENST00000526024 482 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AP003392.2-201ENST00000527269 208 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC019288.1-201ENST00000557918 224 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC136619.2-201ENST00000563361 631 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC093249.1-201ENST00000567049 203 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC002400.1-201ENST00000569310 726 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC005668.1-201ENST00000571142 476 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 MIR4782-201ENST00000577987 79 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 WISP1-OT1-201ENST00000602893 642 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC123912.5-201ENST00000605470 343 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AL133445.2-201ENST00000611191 527 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 MIR8070-201ENST00000616510 88 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AL132822.1-201ENST00000617063 513 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC090517.3-201ENST00000625170 141 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.97□□□□□ -2.25
LYSMD1Q96S90 AC092125.1-201ENST00000562568 1995 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 MTND5P35-201ENST00000557537 1720 ntBASIC0.97□□□□□ -2.25
LYSMD1Q96S90 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 RNU6-271P-201ENST00000363858 105 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 SNORA25.8-201ENST00000364831 128 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 RNU6-546P-201ENST00000383991 107 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 RNU6-952P-201ENST00000391164 108 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 MIR1276-201ENST00000408707 83 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 NCOR1P3-201ENST00000420479 303 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 MTCO1P44-201ENST00000441935 243 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 BRK1P2-201ENST00000442875 223 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC010631.1-201ENST00000474150 156 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC108729.1-201ENST00000487812 947 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AP000907.2-201ENST00000530827 353 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 OR6C7P-201ENST00000547875 934 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC122134.1-202ENST00000569111 1201 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AC073410.2-201ENST00000603240 332 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
LYSMD1Q96S90 AL121890.5-201ENST00000620848 304 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 CDR1-202ENST00000625883 1485 ntBASIC0.96□□□□□ -2.26
LYSMD1Q96S90 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 SNORD65.1-201ENST00000390889 71 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 MRPL35P3-201ENST00000421557 364 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 ISCA1P6-201ENST00000427740 390 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 RPS27P1-201ENST00000450552 247 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 RNU7-136P-201ENST00000458819 69 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 SNORA31.16-201ENST00000516773 139 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC109329.1-201ENST00000518744 317 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 SLC2A13P1-201ENST00000531560 322 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC093012.1-202ENST00000549403 582 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 HIGD1AP17-201ENST00000554576 276 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 AC098614.4-201ENST00000607601 462 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
LYSMD1Q96S90 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
LYSMD1Q96S90 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
LYSMD1Q96S90 TEX21P-201ENST00000447107 1476 ntBASIC0.94□□□□□ -2.26
LYSMD1Q96S90 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms