Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 MTCYBP39-201ENST00000437562 491 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AL512286.1-201ENST00000439244 400 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AL161788.1-201ENST00000441805 169 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 FABP5P13-201ENST00000452144 328 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 CKS1BP2-201ENST00000497342 240 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 RNU2-44P-201ENST00000516795 194 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AP001372.4-201ENST00000524889 472 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC136619.2-201ENST00000563361 631 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 NDUFA8P1-201ENST00000605525 367 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC087045.1-201ENST00000605856 382 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.02□□□□□ -2.09
RPRD1AQ96P16 AC022202.1-201ENST00000613515 211 ntBASIC2.02□□□□□ -2.09
RPRD1AQ96P16 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC138393.1-203ENST00000327086 343 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AL591034.2-201ENST00000402839 359 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 EDDM3CP-201ENST00000415977 425 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC009518.2-201ENST00000418056 731 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AL365338.1-201ENST00000422282 858 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AL160275.3-201ENST00000423876 471 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC009238.1-201ENST00000442165 424 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC009237.6-201ENST00000446969 424 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 CYP2C59P-201ENST00000457790 269 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 MED28P2-201ENST00000475771 317 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC010587.1-201ENST00000505809 469 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 FAM92A1P1-201ENST00000528023 890 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC233702.2-202ENST00000562547 291 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC002400.1-201ENST00000569310 726 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC012493.3-201ENST00000604494 112 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC068787.1-201ENST00000623908 691 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AC092656.1-203ENST00000624134 423 ntBASIC2.01□□□□□ -2.09
RPRD1AQ96P16 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPRD1AQ96P16 AL354685.2-201ENST00000448218 1447 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2□□□□□ -2.09
RPRD1AQ96P16 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RPRD1AQ96P16 RNU6-858P-201ENST00000362436 107 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 RNA5SP240-201ENST00000365355 128 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 Y_RNA.623-201ENST00000411128 95 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2□□□□□ -2.09
RPRD1AQ96P16 EIF1AXP1-201ENST00000419267 435 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AL593851.1-201ENST00000426171 157 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 HMGN2P3-201ENST00000433603 273 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 HMGN2P5-201ENST00000436882 273 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 EPS15P1-201ENST00000448836 336 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2□□□□□ -2.09
RPRD1AQ96P16 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 MTAPP1-201ENST00000489154 819 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC112206.3-201ENST00000514578 389 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2□□□□□ -2.09
RPRD1AQ96P16 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2□□□□□ -2.09
RPRD1AQ96P16 PSMA3P-201ENST00000555485 635 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2□□□□□ -2.09
RPRD1AQ96P16 MTCYBP33-201ENST00000575007 1130 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2□□□□□ -2.09
RPRD1AQ96P16 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2□□□□□ -2.09
RPRD1AQ96P16 AL359999.1-201ENST00000604513 294 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC018638.7-201ENST00000605836 1114 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 RNU6-87P-201ENST00000607561 108 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC138749.5-201ENST00000611461 208 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC116165.2-201ENST00000616705 206 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2□□□□□ -2.09
RPRD1AQ96P16 RBBP8P1-201ENST00000449447 1844 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2□□□□□ -2.09
RPRD1AQ96P16 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2□□□□□ -2.09
RPRD1AQ96P16 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
RPRD1AQ96P16 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
RPRD1AQ96P16 AC073343.1-201ENST00000328239 651 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 RNU6-942P-201ENST00000363002 107 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 RNU1-23P-201ENST00000363361 144 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 RNU6-1032P-201ENST00000384100 107 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 RNU2-20P-201ENST00000410425 191 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL031779.1-201ENST00000415663 330 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC114491.1-201ENST00000416095 246 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC011233.1-201ENST00000422812 283 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC008267.5-201ENST00000424928 265 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms