Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL356010.1-201ENST00000456364 102 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC080013.2-201ENST00000460866 323 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC092989.1-201ENST00000481235 277 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC116562.3-201ENST00000506136 177 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 RNU6-581P-201ENST00000516214 105 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 RNU6-835P-201ENST00000516974 104 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC068587.5-201ENST00000528506 175 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 OR4R1P-201ENST00000529879 463 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC010186.2-204ENST00000537668 439 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 MIR4801-201ENST00000582704 82 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 ELOCP29-201ENST00000588193 334 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 RPL12P50-201ENST00000603116 116 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC008121.1-201ENST00000603244 268 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AC130324.3-201ENST00000614165 542 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AL359547.2-201ENST00000615810 418 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AL109809.4-201ENST00000603520 2185 ntBASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM5Q96HC4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-1322P-201ENST00000364309 107 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-61P-201ENST00000365528 109 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-395P-201ENST00000365662 106 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 Y_RNA.534-201ENST00000384599 112 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 U6atac.2-201ENST00000408644 118 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-908P-201ENST00000410160 94 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 MTCO1P20-201ENST00000425366 358 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AL139415.2-201ENST00000431968 163 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC000111.3-201ENST00000433478 193 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AL596276.1-201ENST00000434465 418 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC105272.1-201ENST00000438604 198 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC011816.1-201ENST00000441346 546 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC008571.1-201ENST00000467232 300 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 MTCO3P38-201ENST00000468910 766 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC083798.1-201ENST00000472671 131 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC116655.1-201ENST00000508324 901 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC117522.1-201ENST00000509821 380 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 Y_RNA.689-201ENST00000516589 107 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 SNORA31.19-201ENST00000517079 126 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AL157871.3-201ENST00000557231 293 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC092325.1-201ENST00000566449 554 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 MIR5571-201ENST00000577998 113 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC008752.3-201ENST00000588113 712 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 RBM11P1-201ENST00000604951 799 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AC093788.1-201ENST00000609356 927 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 AP001486.3-201ENST00000615334 372 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 MTND5P17-201ENST00000418405 1603 ntBASIC2.59□□□□□ -1.99
PDLIM5Q96HC4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.59□□□□□ -2
PDLIM5Q96HC4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PDLIM5Q96HC4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -2
PDLIM5Q96HC4 AL161431.1-201ENST00000618966 4205 ntBASIC2.59□□□□□ -2
PDLIM5Q96HC4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -2
PDLIM5Q96HC4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PDLIM5Q96HC4 CDC27P3-201ENST00000635418 1910 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 Y_RNA.38-201ENST00000362617 102 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 MIR491-201ENST00000384877 84 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 SNORA48.2-201ENST00000390926 124 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AL591416.1-201ENST00000404015 867 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 RPLP0P7-201ENST00000416050 667 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC016691.1-201ENST00000441321 413 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 RPS29P25-201ENST00000481709 171 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 MTAPP1-201ENST00000489154 819 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC105417.1-201ENST00000514691 285 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 SNORA40.12-201ENST00000516329 111 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
PDLIM5Q96HC4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.58□□□□□ -2
PDLIM5Q96HC4 AC009163.5-201ENST00000575421 637 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms