Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNA5SP390-201ENST00000410191 113 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 EEF1A1P40-201ENST00000412883 573 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 RPLP0P7-201ENST00000416050 667 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC074117.2-201ENST00000417130 397 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 C1DP2-201ENST00000418167 426 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VMP1Q96GC9 AL133217.1-201ENST00000450980 425 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 snoU109.1-201ENST00000459339 135 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 UBE2DNL-203ENST00000474922 222 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AP001025.1-201ENST00000486139 332 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 SNORA43.2-201ENST00000516652 128 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC034114.1-201ENST00000520293 285 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 BNIP3P6-201ENST00000549284 499 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC093249.1-201ENST00000567049 203 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 MTATP6P24-201ENST00000576835 677 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 MIR4672-201ENST00000583126 81 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AL031274.2-201ENST00000599419 203 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC090578.1-201ENST00000604955 591 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC026585.1-201ENST00000619582 524 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 SDR42E1P4-201ENST00000620894 481 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 AL603839.4-201ENST00000624658 1005 ntBASIC2.43□□□□□ -2.02
VMP1Q96GC9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VMP1Q96GC9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VMP1Q96GC9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VMP1Q96GC9 RNU1-23P-201ENST00000363361 144 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 RNU6-529P-201ENST00000363383 104 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 U8.8-201ENST00000365399 135 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 MTCO3P5-201ENST00000433620 714 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VMP1Q96GC9 AL033528.1-201ENST00000453780 140 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC018868.1-201ENST00000491307 315 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 AP001646.1-201ENST00000527936 915 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC233702.2-202ENST00000562547 291 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.42□□□□□ -2.02
VMP1Q96GC9 MIR3915-201ENST00000578518 97 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AL162373.1-201ENST00000620433 407 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AL359740.1-201ENST00000624340 592 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC007494.3-201ENST00000624660 743 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 AC110994.2-201ENST00000635481 492 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 U6.114-201ENST00000636407 96 ntBASIC2.42□□□□□ -2.02
VMP1Q96GC9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VMP1Q96GC9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VMP1Q96GC9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 RNU6-655P-201ENST00000362858 107 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 Y_RNA.576-201ENST00000384781 102 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 SNORA46.1-201ENST00000391069 153 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC011816.1-201ENST00000441346 546 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC104058.1-201ENST00000448028 297 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 MTCYBP35-201ENST00000503630 1137 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC104806.1-201ENST00000508720 308 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 RNU1-86P-201ENST00000516108 154 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 RNU1-107P-201ENST00000516617 154 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC090572.1-201ENST00000519251 160 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 AP000889.1-201ENST00000530968 660 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC026271.5-201ENST00000577873 130 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC090897.2-201ENST00000581715 130 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC098848.2-201ENST00000588023 330 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 ELOCP5-201ENST00000604924 333 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC093648.1-201ENST00000623546 606 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 AC090517.3-201ENST00000625170 141 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 MTND5P17-201ENST00000418405 1603 ntBASIC2.41□□□□□ -2.02
VMP1Q96GC9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VMP1Q96GC9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
VMP1Q96GC9 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.02
VMP1Q96GC9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.4□□□□□ -2.02
VMP1Q96GC9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 SNORD115-7-201ENST00000365306 82 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 SNORA40.3-201ENST00000390964 122 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 HMGN2P39-201ENST00000398005 273 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 RNU2-23P-201ENST00000410545 195 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 HMGN1P14-201ENST00000412459 517 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.4□□□□□ -2.03
VMP1Q96GC9 CYCSP46-201ENST00000423569 204 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 ISCA1P6-201ENST00000427740 390 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.4□□□□□ -2.03
VMP1Q96GC9 HMGB1P31-201ENST00000437242 427 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms