Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 SNORD26-201ENST00000384147 75 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 Y_RNA.495-201ENST00000384435 112 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 MIR496-201ENST00000385226 102 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 SNORA40.19-201ENST00000390846 128 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 TOMM22P2-201ENST00000430735 237 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AL512637.2-201ENST00000431287 1256 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC092001.1-201ENST00000453012 261 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 FAM206BP-201ENST00000510179 541 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC008834.1-201ENST00000511612 175 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 MIR892C-201ENST00000516410 77 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 SNORA31.22-201ENST00000517204 135 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 OR5B19P-201ENST00000531766 928 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC124947.2-202ENST00000552735 133 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 UBE2L4-201ENST00000587688 464 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 BNIP3P16-201ENST00000589779 534 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.57□□□□□ -2.32
TTC28Q96AY4 AP000403.1-201ENST00000603349 851 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AL355802.3-201ENST00000607571 545 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 AL121652.1-201ENST00000608851 448 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 FRG1HP-204ENST00000617940 757 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 U6.101-201ENST00000637707 76 ntBASIC0.57□□□□□ -2.32
TTC28Q96AY4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TTC28Q96AY4 MTCO1P18-201ENST00000455518 1419 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 Y_RNA.190-201ENST00000363964 101 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 SNORA4.3-201ENST00000365564 137 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RNU2-28P-201ENST00000410457 189 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 VN1R42P-201ENST00000424651 344 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RPL31P54-201ENST00000429803 370 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 HSPE1P21-201ENST00000438283 308 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 AL357134.1-201ENST00000445848 426 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 DDX3P2-201ENST00000446138 111 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RPL23AP6-201ENST00000446637 472 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 snoU13.21-201ENST00000459368 105 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 SMURF2P1-201ENST00000514992 481 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 SNORA14.1-201ENST00000516113 141 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 SNORA62.5-201ENST00000516634 120 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 IGJP1-201ENST00000522682 475 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 DUXAP10-204ENST00000612052 616 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 AC009233.1-201ENST00000616477 371 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 MIR6130-201ENST00000619419 109 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TTC28Q96AY4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 RNA5SP240-201ENST00000365355 128 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 MIR604-201ENST00000384880 94 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RPS3AP36-201ENST00000398190 775 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 NDUFA5P7-201ENST00000452914 242 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 AC022483.1-201ENST00000514020 567 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RNU6-1256P-201ENST00000516539 103 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RNU6-885P-201ENST00000516607 104 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RNU6-1121P-201ENST00000516802 109 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 MIR3126-201ENST00000577443 74 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 MIR3198-2-201ENST00000577868 80 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.56□□□□□ -2.32
TTC28Q96AY4 AL138713.1-201ENST00000624026 2130 ntBASIC0.56□□□□□ -2.32
TTC28Q96AY4 RNU6-923P-201ENST00000364753 107 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 RNU6-119P-201ENST00000364882 107 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AL121978.1-201ENST00000402778 359 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 MIR1285-2-201ENST00000408311 88 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 USP9YP19-201ENST00000412165 485 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 USP9YP13-201ENST00000417797 480 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 Z80107.1-201ENST00000436830 412 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AL590365.1-201ENST00000450788 243 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC091435.1-201ENST00000505442 584 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC243960.4-201ENST00000600532 288 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC016925.2-201ENST00000605108 242 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC024060.1-201ENST00000607052 494 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 U2.21-201ENST00000637295 81 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 Y_RNA.78-201ENST00000362970 110 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 SNORA8-201ENST00000384574 139 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 RNU6-939P-201ENST00000384634 107 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 RNU11-3P-201ENST00000391111 133 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 VN1R36P-201ENST00000414936 291 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 RPL30P13-201ENST00000418873 348 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC005345.1-201ENST00000431868 217 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 RNU6-1191P-201ENST00000516799 107 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 ARL2BPP5-201ENST00000523141 481 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC023050.3-201ENST00000541142 333 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms