Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTP4A1Q93096 RNU6-384P-201ENST00000364900 104 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 RNU5E-7P-201ENST00000365290 117 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 RNU6-622P-201ENST00000384272 103 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PTP4A1Q93096 SNORA40.19-201ENST00000390846 128 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 RNU2-23P-201ENST00000410545 195 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 Z92545.1-201ENST00000411782 234 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.34□□□□□ -2.03
PTP4A1Q93096 EDDM3CP-201ENST00000415977 425 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
PTP4A1Q93096 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC097462.2-201ENST00000504623 481 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC074344.1-201ENST00000512823 224 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 RNA5SP503-201ENST00000517047 117 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.34□□□□□ -2.03
PTP4A1Q93096 IMMP1LP2-201ENST00000552954 492 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC090897.2-201ENST00000581715 130 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC007229.1-201ENST00000590455 412 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 CLIC4P2-201ENST00000601934 717 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 Z94722.1-201ENST00000604328 474 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC064872.1-201ENST00000604823 1072 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 AC072046.2-201ENST00000618366 268 ntBASIC2.34□□□□□ -2.03
PTP4A1Q93096 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PTP4A1Q93096 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 RNU6-1210P-201ENST00000363775 107 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 Y_RNA.201-201ENST00000364052 96 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 SNORA62.1-201ENST00000364287 154 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 PIGFP2-201ENST00000421400 651 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 AC105272.1-201ENST00000438604 198 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 MTND3P7-201ENST00000474435 343 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 RNA5SP137-201ENST00000516833 135 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 SNORA31.23-201ENST00000517219 133 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 AC109347.2-201ENST00000610220 349 ntBASIC2.33□□□□□ -2.04
PTP4A1Q93096 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
PTP4A1Q93096 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTP4A1Q93096 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 SNORA25B-201ENST00000365507 128 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 RNU6-45P-201ENST00000384471 107 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PTP4A1Q93096 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AL355497.1-201ENST00000406262 551 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 RNU4-46P-201ENST00000410818 138 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 RPLP0P7-201ENST00000416050 667 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC008267.5-201ENST00000424928 265 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AIMP1P2-201ENST00000425294 312 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC133104.1-201ENST00000429100 218 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AL591043.1-201ENST00000432461 424 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 RPL23AP49-201ENST00000492925 468 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 SNORD27.1-201ENST00000516319 72 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 CKS1BP7-201ENST00000522230 235 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 DUXAP5-201ENST00000529668 529 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 BNIP3P6-201ENST00000549284 499 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 MIR5092-201ENST00000583139 88 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC068790.2-201ENST00000602601 557 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC008945.2-201ENST00000606056 604 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC090517.3-201ENST00000625170 141 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 Z82195.2-201ENST00000612348 18351 ntBASIC2.32□□□□□ -2.04
PTP4A1Q93096 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.32□□□□□ -2.04
PTP4A1Q93096 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTP4A1Q93096 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTP4A1Q93096 RNU6-212P-201ENST00000362642 104 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 SNORD56.1-201ENST00000362913 68 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 U3.4-201ENST00000363352 213 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 RNU6-456P-201ENST00000384493 107 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 RNU6-1245P-201ENST00000411130 106 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 RNU6-607P-201ENST00000411283 108 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 MTND1P23-201ENST00000416931 372 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 AL596276.1-201ENST00000434465 418 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 PSPHP1-201ENST00000450062 261 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 AC107032.1-201ENST00000485945 480 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.31□□□□□ -2.04
PTP4A1Q93096 RNU1-86P-201ENST00000516108 154 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 RNU1-107P-201ENST00000516617 154 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 AC060788.1-201ENST00000521318 469 ntBASIC2.31□□□□□ -2.04
PTP4A1Q93096 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PTP4A1Q93096 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.31□□□□□ -2.04
PTP4A1Q93096 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.31□□□□□ -2.04
PTP4A1Q93096 AC093249.1-201ENST00000567049 203 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms