Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATP2A3Q93084 FTLP6-201ENST00000355274 422 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 Y_RNA.167-201ENST00000363735 109 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 Y_RNA.378-201ENST00000365652 113 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 RNU6-510P-201ENST00000391239 108 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 AL714022.1-201ENST00000439897 151 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 RNU7-66P-201ENST00000459469 62 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 RNU6-1208P-201ENST00000459588 107 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 RNU6-329P-201ENST00000459618 107 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 AP001486.1-201ENST00000463339 476 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 AL049873.1-201ENST00000480540 376 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 RPL7P20-201ENST00000520308 745 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 PSMA3P-201ENST00000555485 635 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 MIR5692A1-201ENST00000580523 69 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.32□□□□□ -1.88
ATP2A3Q93084 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 uc_338.5-201ENST00000611839 155 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 AC004852.3-201ENST00000614131 326 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.32□□□□□ -1.88
ATP2A3Q93084 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 MIR148B-201ENST00000362252 99 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 SNORA4.3-201ENST00000365564 137 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RNU6-1227P-201ENST00000383981 107 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RNU6-217P-201ENST00000384164 104 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 RNA5SP354-201ENST00000391247 136 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 POLHP1-201ENST00000411806 470 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 HMGB1P18-201ENST00000438801 619 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RPL23AP58-201ENST00000440453 469 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RPS24P13-201ENST00000442520 397 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RPL12P25-201ENST00000455592 494 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 Y_RNA.632-201ENST00000459189 102 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RPL21P41-201ENST00000459863 264 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 RNU6-1315P-201ENST00000517187 99 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 AC245166.1-201ENST00000521012 253 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 OR11H5P-201ENST00000554039 926 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 EIF4BP1-201ENST00000554881 351 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 LARP7P3-201ENST00000579888 337 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 MIR548AC-201ENST00000585049 88 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 AC092747.3-201ENST00000603769 301 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 AL137843.1-201ENST00000605078 385 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 AC004832.5-201ENST00000608677 401 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 Z82243.1-201ENST00000609432 473 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 GABRG2-229ENST00000641017 3628 ntBASIC3.31□□□□□ -1.88
ATP2A3Q93084 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.31□□□□□ -1.88
ATP2A3Q93084 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP2A3Q93084 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATP2A3Q93084 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ATP2A3Q93084 Y_RNA.399-201ENST00000383955 105 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 Y_RNA.530-201ENST00000384587 101 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 RNU4-14P-201ENST00000410858 122 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 COTL1P1-201ENST00000422309 375 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 FABP5P15-201ENST00000453566 214 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 SUMO2P6-201ENST00000505273 288 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 HIGD1AP13-201ENST00000509878 289 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 RNU6-189P-201ENST00000516120 101 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 Y_RNA.691-201ENST00000516611 103 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 AC022080.3-201ENST00000544433 482 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.3□□□□□ -1.88
ATP2A3Q93084 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 MIR1273C-201ENST00000578669 77 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
ATP2A3Q93084 MIR4513-201ENST00000581077 86 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms