Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TM9SF4Q92544 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 Y_RNA.184-201ENST00000363884 108 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 MIR578-201ENST00000384828 96 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AL356432.1-201ENST00000405809 419 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 MIR1290-201ENST00000408735 78 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 RNA5SP38-201ENST00000410750 119 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 POLHP1-201ENST00000411806 470 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 MRPL50P4-201ENST00000446432 475 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 FABP5P15-201ENST00000453566 214 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 RPL21P41-201ENST00000459863 264 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC007547.1-201ENST00000462177 490 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC087884.1-201ENST00000469738 328 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 TBCAP3-201ENST00000512475 312 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC091826.1-201ENST00000514065 313 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 RNU2-69P-201ENST00000516061 100 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC090115.3-201ENST00000553218 849 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 PSMA3P-201ENST00000555485 635 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 MIR4742-201ENST00000581069 85 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 FGF7P1-201ENST00000582820 288 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC005261.5-201ENST00000596280 355 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 VN1R80P-201ENST00000597126 338 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 C8orf59P2-201ENST00000603441 271 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 ATP1B3P1-201ENST00000605365 821 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AL133216.2-202ENST00000634512 349 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC112487.2-201ENST00000637950 304 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.77□□□□□ -1.97
TM9SF4Q92544 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
TM9SF4Q92544 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TM9SF4Q92544 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 RNU6-1252P-201ENST00000363054 104 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 RNU6-797P-201ENST00000363101 109 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 RNU6-371P-201ENST00000364283 108 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 SNORA9.2-201ENST00000365361 133 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 RNU6-741P-201ENST00000383889 107 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 RNA5SP219-201ENST00000390940 113 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 RPS4XP7-201ENST00000406274 780 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 ZNF863P-201ENST00000426746 417 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AL356867.1-201ENST00000429623 299 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC104332.2-201ENST00000429959 156 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AL139132.1-201ENST00000431587 344 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 MTND3P23-201ENST00000431980 347 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AL591704.1-201ENST00000432574 275 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC092573.2-201ENST00000434546 243 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 RNA5SP310-201ENST00000459084 116 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 AP003122.3-201ENST00000526316 255 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC084851.1-201ENST00000529105 249 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC087241.2-201ENST00000535801 324 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 DNAJC8P1-201ENST00000554535 372 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 MIR3162-201ENST00000581818 82 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 MIR3942-201ENST00000585264 109 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC092435.3-201ENST00000565538 3654 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TM9SF4Q92544 AC007785.2-201ENST00000598627 1916 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 CUL1P1-201ENST00000509510 2425 ntBASIC2.76□□□□□ -1.97
TM9SF4Q92544 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.75□□□□□ -1.97
TM9SF4Q92544 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
TM9SF4Q92544 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
TM9SF4Q92544 SNORD3E-201ENST00000362899 217 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 Y_RNA.142-201ENST00000363491 102 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 Y_RNA.166-201ENST00000363730 102 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 Y_RNA.263-201ENST00000364659 114 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TM9SF4Q92544 RNU6-393P-201ENST00000384475 107 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 Y_RNA.529-201ENST00000384586 119 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 RNU6-1197P-201ENST00000391183 107 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TM9SF4Q92544 RNA5SP274-201ENST00000410484 108 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 AC009161.1-201ENST00000417306 376 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 IFNA20P-201ENST00000436840 528 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 AC009237.8-201ENST00000445492 379 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.75□□□□□ -1.97
TM9SF4Q92544 CECR9-201ENST00000453421 199 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 MTND1P11-201ENST00000456661 876 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 RNU6-329P-201ENST00000459618 107 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 RN7SL499P-201ENST00000481141 276 ntBASIC2.75□□□□□ -1.97
TM9SF4Q92544 AC022493.1-201ENST00000492984 337 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms