Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-395P-201ENST00000365662 106 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RTF1Q92541 RNU6-741P-201ENST00000383889 107 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 SNORA54-201ENST00000384281 123 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RTF1Q92541 RNU2-33P-201ENST00000410344 192 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AL353621.1-201ENST00000418219 243 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 RPS15AP6-201ENST00000420703 385 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.03□□□□□ -1.76
RTF1Q92541 FABP5P15-201ENST00000453566 214 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 RPL7P5-201ENST00000471472 736 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC026801.1-201ENST00000497178 464 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.03□□□□□ -1.76
RTF1Q92541 AP003122.3-201ENST00000526316 255 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC084851.1-201ENST00000529105 249 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 OR5D17P-201ENST00000531492 978 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.03□□□□□ -1.76
RTF1Q92541 AL157871.3-201ENST00000557231 293 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.03□□□□□ -1.76
RTF1Q92541 MIR5690-201ENST00000583739 73 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RTF1Q92541 CYP2C61P-201ENST00000604072 290 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC124303.1-201ENST00000605703 360 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC002044.1-201ENST00000606707 158 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AL627309.6-201ENST00000606857 840 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AC010378.1-201ENST00000619270 362 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 AL031601.2-202ENST00000622650 282 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.03□□□□□ -1.76
RTF1Q92541 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.03□□□□□ -1.76
RTF1Q92541 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RTF1Q92541 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
RTF1Q92541 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTF1Q92541 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTF1Q92541 AF117829.1-206ENST00000621883 3802 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTF1Q92541 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RTF1Q92541 RNU6-1303P-201ENST00000364841 107 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.02□□□□□ -1.77
RTF1Q92541 RNU6-692P-201ENST00000384496 107 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 SNORA44-201ENST00000384584 132 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.02□□□□□ -1.77
RTF1Q92541 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.02□□□□□ -1.77
RTF1Q92541 RNU7-138P-201ENST00000459479 64 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 HMGB1P30-201ENST00000492455 606 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.02□□□□□ -1.77
RTF1Q92541 MTND3P25-201ENST00000509243 135 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 AC005741.1-201ENST00000511094 432 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 RNU6-1332P-201ENST00000516666 104 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.02□□□□□ -1.77
RTF1Q92541 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.02□□□□□ -1.77
RTF1Q92541 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.02□□□□□ -1.77
RTF1Q92541 AC020661.2-201ENST00000560114 134 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 AC093732.2-201ENST00000607950 274 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.02□□□□□ -1.77
RTF1Q92541 AC000403.1-201ENST00000613696 3585 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 AC005183.1-201ENST00000603687 1979 ntBASIC4.02□□□□□ -1.77
RTF1Q92541 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RTF1Q92541 Y_RNA.33-201ENST00000362591 102 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 RNU6-1188P-201ENST00000363795 107 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 Y_RNA.187-201ENST00000363918 113 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 Y_RNA.245-201ENST00000364493 95 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTF1Q92541 RNU6-214P-201ENST00000384130 107 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 RNU6-601P-201ENST00000384540 107 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 RPL5P18-201ENST00000406671 891 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 MIR548P-201ENST00000408336 84 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.01□□□□□ -1.77
RTF1Q92541 RPL7P37-201ENST00000425095 738 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AC022018.1-201ENST00000430685 241 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 VDAC1P3-201ENST00000434069 851 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 BRK1P2-201ENST00000442875 223 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.01□□□□□ -1.77
RTF1Q92541 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.01□□□□□ -1.77
RTF1Q92541 AC130509.1-201ENST00000464158 433 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AC027575.1-201ENST00000481064 460 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AC022493.1-201ENST00000492984 337 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.01□□□□□ -1.77
RTF1Q92541 RNA5SP291-201ENST00000517222 105 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 SCARNA20.6-201ENST00000517251 106 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.01□□□□□ -1.77
RTF1Q92541 AC026371.1-201ENST00000551867 419 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.01□□□□□ -1.77
RTF1Q92541 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.01□□□□□ -1.77
RTF1Q92541 AC080078.3-201ENST00000605407 463 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.01□□□□□ -1.77
RTF1Q92541 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTF1Q92541 MIR7153-201ENST00000637758 57 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTF1Q92541 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
RTF1Q92541 MTND4P27-201ENST00000450813 1354 ntBASIC4.01□□□□□ -1.77
RTF1Q92541 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTF1Q92541 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4□□□□□ -1.77
RTF1Q92541 Y_RNA.162-201ENST00000363683 102 ntBASIC4□□□□□ -1.77
RTF1Q92541 MIR634-201ENST00000385208 97 ntBASIC4□□□□□ -1.77
RTF1Q92541 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
RTF1Q92541 RNU2-3P-201ENST00000410144 191 ntBASIC4□□□□□ -1.77
RTF1Q92541 COTL1P1-201ENST00000422309 375 ntBASIC4□□□□□ -1.77
RTF1Q92541 GPM6BP2-201ENST00000432046 144 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms