Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC007785.2-201ENST00000598627 1916 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 RNU6-1020P-201ENST00000363684 107 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 SNORD20-201ENST00000384550 80 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 U8.11-201ENST00000384699 133 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 U8.12-201ENST00000384701 133 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 MIR607-201ENST00000385241 96 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 RNU6-394P-201ENST00000410735 107 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AC007098.1-201ENST00000420122 367 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AC092573.2-201ENST00000434546 243 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 Z82210.1-201ENST00000440037 231 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AL078601.1-201ENST00000444542 271 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 U8.18-201ENST00000459285 133 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 RN7SL323P-201ENST00000494712 295 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AC074250.1-201ENST00000511117 192 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 RNU6-572P-201ENST00000516724 80 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 Z83818.1-201ENST00000603584 150 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 MIR432-201ENST00000606207 94 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AC139713.2-215ENST00000641428 5037 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 BX322639.1-202ENST00000423987 2213 ntBASIC4.36□□□□□ -1.71
TMEM40Q8WWA1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AC007685.1-201ENST00000329806 452 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 RNU6-600P-201ENST00000362524 99 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 Y_RNA.439-201ENST00000384119 94 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 RNU6-959P-201ENST00000384671 107 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 RNA5SP372-201ENST00000390836 115 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 MTND3P9-201ENST00000429526 346 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AL159987.2-201ENST00000432754 307 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AL358232.1-201ENST00000448030 501 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AC087477.1-201ENST00000465747 340 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 SCARNA14-201ENST00000516903 136 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 IGKV2-38-201ENST00000517443 247 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AC109479.2-201ENST00000517842 174 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AC093023.1-201ENST00000547375 507 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 MIR5701-3-201ENST00000578890 82 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 MIR5701-1-201ENST00000585138 82 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AC072026.1-201ENST00000605023 201 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 MIR5701-2-201ENST00000615634 82 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 AC099506.2-201ENST00000623074 221 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 MARK2P15-201ENST00000432204 2186 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 Z82217.1-201ENST00000625157 8149 ntBASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM40Q8WWA1 LINC02555-201ENST00000563933 1951 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 RNY4P28-201ENST00000365281 93 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 RNU6-166P-201ENST00000384371 107 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 U3.39-201ENST00000408569 239 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 RN7SKP156-201ENST00000410308 342 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AL117339.3-201ENST00000418733 162 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AL031659.1-201ENST00000447075 539 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC092798.1-201ENST00000458542 409 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AL049830.2-201ENST00000480072 201 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 RPL7P47-201ENST00000497299 556 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AK3P2-201ENST00000507976 429 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 SNORD116-28-201ENST00000516123 91 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 SYF2P1-201ENST00000550658 413 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC103996.1-201ENST00000555468 102 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC087499.8-201ENST00000578406 226 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 AL365222.1-201ENST00000614661 98 ntBASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM40Q8WWA1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.72
TMEM40Q8WWA1 AC092435.4-201ENST00000623012 4159 ntBASIC4.34□□□□□ -1.72
TMEM40Q8WWA1 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms