Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM41Q8WV44 SNORD116-18-201ENST00000383961 92 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 OOSP1P1-201ENST00000423265 274 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM41Q8WV44 RNU6-377P-201ENST00000515965 102 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM41Q8WV44 MIR4716-201ENST00000579628 84 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 MIR3922-201ENST00000585192 84 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 AL161798.1-201ENST00000604630 131 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 AC011921.3-201ENST00000605540 361 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 AL360181.4-201ENST00000621752 134 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 AL451142.2-201ENST00000429076 2090 ntBASIC7.16□□□□□ -1.26
TRIM41Q8WV44 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM41Q8WV44 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM41Q8WV44 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 AC018529.3-201ENST00000624212 2254 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 CRP-203ENST00000368111 512 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 SNORA57.3-201ENST00000411095 141 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 Y_RNA.623-201ENST00000411128 95 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 BMS1P22-201ENST00000414726 313 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 snoU13.30-201ENST00000458951 104 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 RPL30P1-201ENST00000488676 339 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 ENSA-210ENST00000503241 574 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 AC074133.1-201ENST00000515696 183 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 AC084851.1-201ENST00000529105 249 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 MIR4512-201ENST00000583257 77 ntBASIC7.15□□□□□ -1.26
TRIM41Q8WV44 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM41Q8WV44 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM41Q8WV44 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC7.15□□□□□ -1.27
TRIM41Q8WV44 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 Y_RNA.343-201ENST00000365354 112 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 Y_RNA.497-201ENST00000384447 98 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 RNU6-959P-201ENST00000384671 107 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 MTATP6P4-201ENST00000427725 675 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 MTCO1P5-201ENST00000433573 344 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AC025518.1-201ENST00000479856 347 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AL049830.2-201ENST00000480072 201 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AP001025.1-201ENST00000486139 332 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AC005476.1-201ENST00000554427 397 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 AC060766.3-201ENST00000591442 263 ntBASIC7.14□□□□□ -1.27
TRIM41Q8WV44 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM41Q8WV44 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 AC233981.2-201ENST00000611524 1614 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 SNORA22C-201ENST00000384614 134 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 BTF3L4P2-201ENST00000392798 346 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 CKS1BP5-201ENST00000434172 273 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 AC016700.2-201ENST00000446011 156 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 HSPE1P6-201ENST00000479457 291 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 RNA5SP360-201ENST00000516555 118 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM41Q8WV44 OR4G2P-202ENST00000641004 1759 ntBASIC7.13□□□□□ -1.27
TRIM41Q8WV44 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 RNA5SP267-201ENST00000364893 126 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 RNU4-9P-201ENST00000364951 139 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 RNU6-1289P-201ENST00000384431 106 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 RNU6-837P-201ENST00000391056 108 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 UBA52P6-201ENST00000399822 382 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AL590399.6-201ENST00000446396 307 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AC022968.1-201ENST00000567372 442 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AC005255.1-201ENST00000593748 216 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 AC093591.2-201ENST00000565254 3843 ntBASIC7.12□□□□□ -1.27
TRIM41Q8WV44 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
TRIM41Q8WV44 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC7.11□□□□□ -1.27
TRIM41Q8WV44 BCLAF1P2-201ENST00000624956 2609 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms