Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AP001324.2-201ENST00000461163 319 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC023194.1-201ENST00000493084 308 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.56□□□□□ -2
RTL3Q8N8U3 AC011352.1-201ENST00000512300 793 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC010493.1-201ENST00000513479 292 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.56□□□□□ -2
RTL3Q8N8U3 RNU6-914P-201ENST00000516749 109 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 RNU6-410P-201ENST00000517006 107 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
RTL3Q8N8U3 AC136619.2-201ENST00000563361 631 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC234778.2-201ENST00000566241 354 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 MIR4672-201ENST00000583126 81 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC107304.1-201ENST00000604229 296 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AP001330.5-201ENST00000607176 411 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AC092794.1-201ENST00000612734 582 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 AL157786.1-207ENST00000627771 695 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 MIR6863-201ENST00000636112 90 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTL3Q8N8U3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RTL3Q8N8U3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.56□□□□□ -2
RTL3Q8N8U3 AL109809.4-201ENST00000603520 2185 ntBASIC2.56□□□□□ -2
RTL3Q8N8U3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.55□□□□□ -2
RTL3Q8N8U3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.55□□□□□ -2
RTL3Q8N8U3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RTL3Q8N8U3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.55□□□□□ -2
RTL3Q8N8U3 U3.12-201ENST00000364498 214 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 Y_RNA.367-201ENST00000365544 101 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.55□□□□□ -2
RTL3Q8N8U3 RNU6-748P-201ENST00000384648 107 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.55□□□□□ -2
RTL3Q8N8U3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.55□□□□□ -2
RTL3Q8N8U3 OR51A5P-201ENST00000415429 942 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 MTATP6P18-201ENST00000417994 673 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.55□□□□□ -2
RTL3Q8N8U3 AL353193.1-201ENST00000421444 268 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.55□□□□□ -2
RTL3Q8N8U3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTL3Q8N8U3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.55□□□□□ -2
RTL3Q8N8U3 RPL30P4-201ENST00000429309 333 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 RPL23AP30-201ENST00000432419 501 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AL591704.1-201ENST00000432574 275 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC080013.2-201ENST00000460866 323 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AP000852.1-201ENST00000472460 573 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC126389.1-201ENST00000477436 290 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 SNORA31.19-201ENST00000517079 126 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC009902.1-201ENST00000519351 183 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC090136.1-201ENST00000520009 240 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.55□□□□□ -2
RTL3Q8N8U3 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 SUB1P2-201ENST00000556401 297 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.55□□□□□ -2
RTL3Q8N8U3 AC105245.1-201ENST00000581934 244 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC007938.3-201ENST00000604965 623 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AC126118.1-201ENST00000607744 628 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 AP001486.3-201ENST00000615334 372 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 MIR6134-201ENST00000617606 109 ntBASIC2.55□□□□□ -2
RTL3Q8N8U3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTL3Q8N8U3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
RTL3Q8N8U3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
RTL3Q8N8U3 AC027514.1-201ENST00000588561 1603 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC073343.1-201ENST00000328239 651 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 RNU6-1120P-201ENST00000362988 108 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 Y_RNA.534-201ENST00000384599 112 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 MIR1-2-201ENST00000384961 85 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.54□□□□□ -2
RTL3Q8N8U3 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 U6atac.2-201ENST00000408644 118 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 USP9YP18-201ENST00000425912 695 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.54□□□□□ -2
RTL3Q8N8U3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.54□□□□□ -2
RTL3Q8N8U3 AL078601.1-201ENST00000444542 271 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 FABP5P13-201ENST00000452144 328 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.54□□□□□ -2
RTL3Q8N8U3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.54□□□□□ -2
RTL3Q8N8U3 AC022364.2-201ENST00000457963 554 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.54□□□□□ -2
RTL3Q8N8U3 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.54□□□□□ -2
RTL3Q8N8U3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AC116655.1-201ENST00000508324 901 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.54□□□□□ -2
RTL3Q8N8U3 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 AL157871.3-201ENST00000557231 293 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.54□□□□□ -2
RTL3Q8N8U3 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
RTL3Q8N8U3 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms