Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AL355598.1-201ENST00000604169 202 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC018889.1-201ENST00000605372 397 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AL356274.2-201ENST00000624379 3752 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AC006504.1-201ENST00000562493 3666 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 SNORD6-201ENST00000365444 73 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 Y_RNA.428-201ENST00000384078 102 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 MIR517A-201ENST00000385001 87 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 MT-TR-201ENST00000387439 65 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL357075.1-201ENST00000404107 726 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 RNU4-47P-201ENST00000410876 114 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL159169.1-201ENST00000421119 127 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 NUP35P1-201ENST00000422734 947 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 HMGB1P9-201ENST00000429856 646 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL133396.1-201ENST00000432048 687 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AC112492.4-201ENST00000456549 352 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AC010655.3-201ENST00000478818 450 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 APOOP4-201ENST00000513530 597 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 RNU2-58P-201ENST00000516403 183 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 SNORD116.3-201ENST00000517176 78 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL121603.1-201ENST00000553815 142 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 HMGN2P28-201ENST00000606102 262 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AC034102.8-201ENST00000615146 484 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AL031601.2-202ENST00000622650 282 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 AC007792.1-201ENST00000623023 402 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.53□□□□□ -1.84
SLC44A3Q8N4M1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.151-201ENST00000363566 112 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.176-201ENST00000363815 109 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 SNORD73A-201ENST00000386062 65 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 MIR1302-3-201ENST00000408128 138 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.618-201ENST00000410949 107 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AL353621.1-201ENST00000418219 243 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC079780.1-201ENST00000428259 207 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 USP9YP7-201ENST00000436723 430 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC011816.1-201ENST00000441346 546 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 RPS24P13-201ENST00000442520 397 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 USP9YP32-201ENST00000452432 430 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC104576.1-201ENST00000524225 88 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 SUB1P3-201ENST00000564581 315 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 MIR5692A1-201ENST00000580523 69 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 MIR548AC-201ENST00000585049 88 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC006557.5-201ENST00000603126 811 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC092447.9-201ENST00000603395 144 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 NUTF2P8-201ENST00000604593 363 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC012531.5-201ENST00000611375 151 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC107871.2-201ENST00000612894 502 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 RMST_4.1-201ENST00000616886 107 ntBASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC44A3Q8N4M1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC004944.1-201ENST00000517807 3059 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 MIR422A-201ENST00000362286 90 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 Y_RNA.2-201ENST00000362330 96 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 RNU6-174P-201ENST00000410406 106 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AL513331.1-201ENST00000411908 397 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 MTCO1P39-201ENST00000426148 480 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC087588.1-201ENST00000462203 316 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 RN7SL594P-201ENST00000470590 287 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 HSPE1P6-201ENST00000479457 291 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC022493.1-201ENST00000492984 337 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.51□□□□□ -1.85
SLC44A3Q8N4M1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms