Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC068135.1-201ENST00000446164 246 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 SNORD116-28-201ENST00000516123 91 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 OR6C7P-201ENST00000547875 934 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 LINC00557-201ENST00000563184 1279 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AL365204.3-201ENST00000612448 685 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC091965.5-201ENST00000624785 342 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC092125.1-201ENST00000562568 1995 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 SNORA4.1-201ENST00000364263 144 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 RNA5SP127-201ENST00000411051 133 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 USP9YP19-201ENST00000412165 485 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 NDUFS5P4-201ENST00000412983 318 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 USP9YP13-201ENST00000417797 480 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AL353691.1-201ENST00000451332 387 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AL441985.1-201ENST00000457727 251 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AP001324.2-201ENST00000461163 319 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 HMGN1P13-201ENST00000505795 138 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 NRON-201ENST00000517270 370 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC006518.2-201ENST00000542513 940 ntBASIC0.55□□□□□ -2.32
VPS8Q8N3P4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
VPS8Q8N3P4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AL031577.2-201ENST00000404133 280 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 RN7SKP200-201ENST00000410564 320 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 MTCYBP32-201ENST00000427945 1084 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AC027119.1-201ENST00000440877 241 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 RPS20P10-201ENST00000451209 253 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AL163195.1-201ENST00000496941 348 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.54□□□□□ -2.32
VPS8Q8N3P4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS8Q8N3P4 CYP3A52P-201ENST00000563326 91 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AL713866.2-201ENST00000603579 219 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AL671309.1-201ENST00000603750 544 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 AL022345.2-201ENST00000606307 135 ntBASIC0.54□□□□□ -2.32
VPS8Q8N3P4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.54□□□□□ -2.32
VPS8Q8N3P4 MIR506-201ENST00000384998 124 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 AL591034.2-201ENST00000402839 359 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS8Q8N3P4 RPS27P22-201ENST00000478056 241 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 RPL21P47-201ENST00000483696 477 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 LRRC34P2-201ENST00000514850 553 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 RNU6-667P-201ENST00000517186 102 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 CYCSP23-201ENST00000519781 313 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 AP003066.2-201ENST00000529375 555 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 ZNF705CP-201ENST00000530515 889 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 AC090079.2-201ENST00000575289 768 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.53□□□□□ -2.32
VPS8Q8N3P4 BX284668.6-201ENST00000606899 438 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS8Q8N3P4 AC073569.3-201ENST00000619055 682 ntBASIC0.53□□□□□ -2.32
VPS8Q8N3P4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.53□□□□□ -2.33
VPS8Q8N3P4 RNU1-58P-201ENST00000362413 163 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 RNU1-23P-201ENST00000363361 144 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VPS8Q8N3P4 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 AC132479.1-201ENST00000449160 144 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 CYCSP27-201ENST00000527643 293 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 AC016542.1-201ENST00000608259 493 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 AC017037.3-201ENST00000625016 472 ntBASIC0.52□□□□□ -2.33
VPS8Q8N3P4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
VPS8Q8N3P4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.51□□□□□ -2.33
VPS8Q8N3P4 U3.8-201ENST00000363675 217 ntBASIC0.51□□□□□ -2.33
VPS8Q8N3P4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS8Q8N3P4 HIGD1AP6-201ENST00000521833 279 ntBASIC0.51□□□□□ -2.33
VPS8Q8N3P4 AC023932.2-201ENST00000603176 175 ntBASIC0.51□□□□□ -2.33
VPS8Q8N3P4 AL138713.1-201ENST00000624026 2130 ntBASIC0.51□□□□□ -2.33
VPS8Q8N3P4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 RNU6-222P-201ENST00000362438 107 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 SNORA25-201ENST00000384384 134 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 MIR1197-201ENST00000408818 88 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 LINC01347-201ENST00000417964 355 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 RPL31P3-201ENST00000458430 332 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 SNORA77B-201ENST00000578179 125 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 AC090970.3-201ENST00000612566 866 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
VPS8Q8N3P4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS8Q8N3P4 RNA5SP62-201ENST00000363457 110 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 MIR608-201ENST00000384820 100 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC139712.2-201ENST00000424302 339 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC244023.1-201ENST00000426884 112 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS8Q8N3P4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC108078.1-201ENST00000508073 725 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms