Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR3941-201ENST00000582572 103 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 ELOCP29-201ENST00000588193 334 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.23□□□□□ -1.89
VPS52Q8N1B4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS52Q8N1B4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 MIR888-201ENST00000401186 77 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AL162578.1-201ENST00000406202 378 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RNA5SP38-201ENST00000410750 119 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RNU6-607P-201ENST00000411283 108 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 NDUFB1P2-201ENST00000449477 176 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RPL12P25-201ENST00000455592 494 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AL590639.1-201ENST00000456484 337 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC117440.1-201ENST00000474107 571 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RPL30P14-201ENST00000482744 348 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC139453.3-201ENST00000493276 369 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC083906.5-201ENST00000503722 328 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 FAM206BP-201ENST00000510179 541 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RNU6-189P-201ENST00000516120 101 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RPL7P20-201ENST00000520308 745 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 PSMA3P-201ENST00000555485 635 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC012119.1-201ENST00000603184 222 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 U2.17-201ENST00000611454 95 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 RMST_4.1-201ENST00000616886 107 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AL136221.1-201ENST00000621449 509 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC100810.6-201ENST00000638068 285 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AC138915.1-201ENST00000565427 1685 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 FAM35BP-202ENST00000497389 3337 ntBASIC3.22□□□□□ -1.89
VPS52Q8N1B4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.22□□□□□ -1.89
VPS52Q8N1B4 AL161431.1-201ENST00000618966 4205 ntBASIC3.21□□□□□ -1.89
VPS52Q8N1B4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 MIR449A-201ENST00000362113 91 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 RNU6-778P-201ENST00000363269 103 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 SNORA40C-201ENST00000391285 128 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC009161.1-201ENST00000417306 376 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AL513185.2-201ENST00000425543 193 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 MTCO3P46-201ENST00000425787 232 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 SAR1AP4-201ENST00000429225 591 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 RPS12P18-201ENST00000442381 270 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 PRPS1P1-201ENST00000445305 876 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 RNU7-66P-201ENST00000459469 62 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC007547.1-201ENST00000462177 490 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 HIGD1AP13-201ENST00000509878 289 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC025465.4-201ENST00000513422 638 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 RNU6-928P-201ENST00000516876 104 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 RNU6-1314P-201ENST00000517139 104 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC025755.1-201ENST00000521306 278 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 VN1R80P-201ENST00000597126 338 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC021646.1-201ENST00000605469 484 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AC022306.2-201ENST00000617563 647 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 AL035425.3-201ENST00000564206 4996 ntBASIC3.21□□□□□ -1.9
VPS52Q8N1B4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS52Q8N1B4 MIR412-201ENST00000362142 91 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 SNORA26.7-201ENST00000391288 122 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 RNU2-3P-201ENST00000410144 191 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 RPLP0P7-201ENST00000416050 667 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 USP9YP20-201ENST00000419224 558 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AC098614.3-201ENST00000438957 440 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 MTND5P20-201ENST00000448677 143 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 PMCHL2-203ENST00000457791 237 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 RPS29P12-201ENST00000460178 152 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 MTND3P25-201ENST00000509243 135 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AC098799.2-201ENST00000509466 868 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 RN7SKP132-201ENST00000516001 208 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AC092747.3-201ENST00000603769 301 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 AC010680.1-201ENST00000590024 3590 ntBASIC3.2□□□□□ -1.9
VPS52Q8N1B4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS52Q8N1B4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms