Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC093783.1-201ENST00000612976 329 ntBASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 U6.42-201ENST00000618440 107 ntBASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 CDC27P3-201ENST00000635418 1910 ntBASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 AC093536.2-201ENST00000565257 1406 ntBASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
C9orf40Q8IXQ3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 SNORD3E-201ENST00000362899 217 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-1120P-201ENST00000362988 108 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU4-40P-201ENST00000364351 143 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-1029P-201ENST00000384109 107 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-1179P-201ENST00000384667 107 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-19P-201ENST00000384718 107 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 MIR518D-201ENST00000385014 87 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-550P-201ENST00000391057 101 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU4-53P-201ENST00000410828 140 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC016907.1-201ENST00000419483 435 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AL139413.1-201ENST00000421309 217 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC073464.1-201ENST00000429823 534 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 USP9YP14-201ENST00000430663 563 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RPL23AP70-201ENST00000483361 460 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 GZMAP1-201ENST00000503054 631 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC008413.1-201ENST00000511864 177 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 MTND3P5-201ENST00000512798 333 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNU5F-8P-201ENST00000515941 111 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AP003392.2-201ENST00000527269 208 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC009063.1-201ENST00000563342 702 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC103810.1-201ENST00000579873 453 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 MIR4435-1-201ENST00000582552 80 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC008536.2-201ENST00000607284 349 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 Z99129.1-201ENST00000612510 255 ntBASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.15□□□□□ -2.07
C9orf40Q8IXQ3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 ZNF680P1-201ENST00000436625 1469 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 Y_RNA.159-201ENST00000363674 87 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-371P-201ENST00000364283 108 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-1103P-201ENST00000384150 107 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 Y_RNA.559-201ENST00000384686 107 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 RNU6-606P-201ENST00000384721 111 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 MIR627-201ENST00000384979 97 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL445529.1-201ENST00000398713 389 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL513475.1-201ENST00000406602 315 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 RPL21P90-201ENST00000415692 466 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 PTGES3P4-201ENST00000426243 356 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL627311.1-201ENST00000431514 115 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC000111.3-201ENST00000433478 193 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL596276.1-201ENST00000434465 418 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC002486.1-201ENST00000435098 391 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL451074.3-201ENST00000437709 472 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL360271.2-201ENST00000447710 161 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC108078.1-201ENST00000508073 725 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC116655.1-201ENST00000508324 901 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC008716.1-201ENST00000511084 513 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 COX6CP5-201ENST00000527162 228 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 FAM92A1P1-201ENST00000528023 890 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 MIR5692A1-201ENST00000580523 69 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 NDUFA8P1-201ENST00000605525 367 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC008945.2-201ENST00000606056 604 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC103591.3-201ENST00000608684 209 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AC007684.1-201ENST00000609671 477 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 AL137847.3-201ENST00000611521 109 ntBASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.14□□□□□ -2.07
C9orf40Q8IXQ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms