Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-483P-201ENST00000384088 108 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 Y_RNA.480-201ENST00000384364 102 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 U3.26-201ENST00000391236 204 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 RPS4XP7-201ENST00000406274 780 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 RAP1BP3-201ENST00000407180 549 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 SNORD88.1-201ENST00000408684 91 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 CYCSP33-201ENST00000414485 327 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB1Q86U70 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB1Q86U70 MTCO1P21-201ENST00000416634 589 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 PGBD4P6-201ENST00000421501 610 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 SAR1AP4-201ENST00000429225 591 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 HIGD1AP2-201ENST00000446367 280 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AL441985.1-201ENST00000457727 251 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 RN7SL499P-201ENST00000481141 276 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 Y_RNA.704-201ENST00000516851 102 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 ACA59.2-201ENST00000517061 156 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.71□□□□□ -1.98
LDB1Q86U70 AP004607.1-201ENST00000524456 203 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AK6P1-201ENST00000540219 478 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB1Q86U70 MTCO3P23-201ENST00000561363 289 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 MIR3941-201ENST00000582572 103 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AL162413.1-201ENST00000603198 110 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 AC122108.2-201ENST00000611946 526 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 SCARNA4-202ENST00000625402 129 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 MIR6733-201ENST00000635723 61 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 MIR1321-201ENST00000637766 79 ntBASIC2.71□□□□□ -1.98
LDB1Q86U70 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LDB1Q86U70 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
LDB1Q86U70 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
LDB1Q86U70 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.7□□□□□ -1.98
LDB1Q86U70 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LDB1Q86U70 Y_RNA.9-201ENST00000362354 101 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 RNU6-1083P-201ENST00000384022 107 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 RNU6-748P-201ENST00000384648 107 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 MIR147B-201ENST00000390185 80 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 BTF3P7-201ENST00000407097 488 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 RNU6-648P-201ENST00000410190 107 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 RPL19P1-201ENST00000411635 428 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AF274854.1-201ENST00000413236 615 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AL513477.1-202ENST00000417061 214 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 COTL1P1-201ENST00000422309 375 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 SEPT14P3-201ENST00000439401 183 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AL732372.2-207ENST00000445840 183 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LDB1Q86U70 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB1Q86U70 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB1Q86U70 SEPT14P2-201ENST00000453405 183 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC107626.1-201ENST00000471084 183 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.7□□□□□ -1.98
LDB1Q86U70 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.7□□□□□ -1.98
LDB1Q86U70 SEPT14P4-201ENST00000513445 186 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 RNU4-29P-201ENST00000515943 174 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 RN7SKP132-201ENST00000516001 208 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 SCARNA17.1-201ENST00000516211 143 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 SCARNA17.2-201ENST00000516334 143 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 FO082796.1-201ENST00000523795 183 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB1Q86U70 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB1Q86U70 MIR5583-1-201ENST00000580941 59 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 MIR4424-201ENST00000585257 86 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.7□□□□□ -1.98
LDB1Q86U70 AC080078.2-201ENST00000603766 501 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC069234.5-201ENST00000611056 416 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 uc_338.14-201ENST00000613162 166 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC011890.2-201ENST00000613393 294 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 SCARNA17.4-201ENST00000614296 143 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AC010378.1-201ENST00000619270 362 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 AP003400.5-201ENST00000624827 617 ntBASIC2.7□□□□□ -1.98
LDB1Q86U70 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LDB1Q86U70 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LDB1Q86U70 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LDB1Q86U70 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDB1Q86U70 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LDB1Q86U70 Y_RNA.324-201ENST00000365165 102 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 Y_RNA.554-201ENST00000384672 102 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AL356057.3-201ENST00000402607 340 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 CIR1P3-201ENST00000405137 479 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 FTH1P15-201ENST00000406984 280 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB1Q86U70 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.69□□□□□ -1.98
LDB1Q86U70 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB1Q86U70 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB1Q86U70 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.69□□□□□ -1.98
LDB1Q86U70 AC114781.4-201ENST00000513707 639 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 Y_RNA.687-201ENST00000516558 91 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB1Q86U70 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LDB1Q86U70 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.69□□□□□ -1.98
LDB1Q86U70 LARP7P3-201ENST00000579888 337 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AL033523.1-201ENST00000605153 153 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AL021997.1-201ENST00000605757 193 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 AC004492.1-201ENST00000607036 742 ntBASIC2.69□□□□□ -1.98
LDB1Q86U70 Z82243.1-201ENST00000609432 473 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms