Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 CECR9-201ENST00000453421 199 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AC090572.1-201ENST00000519251 160 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 RPS3AP4-201ENST00000555161 764 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 OR1M4P-201ENST00000589199 287 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AL121992.2-201ENST00000606262 256 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 AC099842.1-201ENST00000619919 596 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 FRG1KP-201ENST00000623592 341 ntBASIC2.76□□□□□ -1.97
NPHP3Q7Z494 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.118-201ENST00000363300 101 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 RNU6-457P-201ENST00000363999 107 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.269-201ENST00000364685 89 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AL663109.1-201ENST00000411498 844 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC092809.3-201ENST00000415453 231 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 ELOCP14-201ENST00000428070 331 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 RPS24P1-201ENST00000438550 371 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 ELOCP7-201ENST00000439968 331 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 MTND4P25-201ENST00000441039 533 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AL136380.1-201ENST00000447970 162 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 RPL23AP63-201ENST00000498752 471 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 RN7SKP298-201ENST00000515950 94 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 OR5B19P-201ENST00000531766 928 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AGGF1P4-201ENST00000568249 801 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 MIR3683-201ENST00000580847 82 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC087683.1-201ENST00000591187 441 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC245014.2-201ENST00000603689 287 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AL161798.1-201ENST00000604630 131 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC246785.4-201ENST00000605374 287 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC064807.4-201ENST00000607201 407 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC109347.2-201ENST00000610220 349 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 Z99129.1-201ENST00000612510 255 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 MIR8070-201ENST00000616510 88 ntBASIC2.75□□□□□ -1.97
NPHP3Q7Z494 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPHP3Q7Z494 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 RNU6-181P-201ENST00000363225 107 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 SET-203ENST00000372688 801 ntTSL 2 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 RNU1-138P-201ENST00000384093 164 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 MIR558-201ENST00000384920 94 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC023141.4-201ENST00000412031 328 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AF274854.1-201ENST00000413236 615 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 PIGFP2-201ENST00000421400 651 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC104651.1-201ENST00000427559 735 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 DPPA3P1-201ENST00000448050 469 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 RNU6-405P-201ENST00000516637 110 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 RNU6-445P-201ENST00000516949 107 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 MTCO2P4-201ENST00000517968 247 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AP003392.2-201ENST00000527269 208 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AL359212.1-201ENST00000556608 614 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC090616.3-201ENST00000582184 217 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC073648.5-201ENST00000603502 305 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AL139286.2-201ENST00000606838 396 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC013562.2-201ENST00000611632 603 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC130324.3-201ENST00000614165 542 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC072046.2-201ENST00000618366 268 ntBASIC2.74□□□□□ -1.97
NPHP3Q7Z494 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NPHP3Q7Z494 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms